ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	HNRNPH1
Previous Symbol	HNRPH1
Symbol Alias	hnRNPH
Approved Name	heterogeneous nuclear ribonucleoprotein H1 (H)
Location	5q35.3
Position	chr5:179041179-179061785, -
External Links	HGNC: 5041 Entrez Gene: 3187 Ensembl: ENSG00000169045 UCSC: uc003mke.3
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by CNV

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 1)

ID	Location	Size	Band	Type	Inheritance
CNV_Jarick[2012]_14	chr5:178157153-180497731 (NCBI36 / hg18)	2340579	5q35.3	dup

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 15)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 15)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0043484	regulation of RNA splicing	Biological Process	IDA[16946708]	4
GO:0071013	catalytic step 2 spliceosome	Cellular Component	IDA[11991638]	31
GO:0010467	gene expression	Biological Process		140
GO:0015629	actin cytoskeleton	Cellular Component		26
GO:0008266	poly(U) RNA binding	Molecular Function	TAS[7499401]	3
GO:0008380	RNA splicing	Biological Process		65
GO:0005737	cytoplasm	Cellular Component		690
GO:0006396	RNA processing	Biological Process	TAS[7499401]	11
GO:0000166	nucleotide binding	Molecular Function		73
GO:0000398	mRNA splicing, via spliceosome	Biological Process	IC[11991638]	54
GO:0003723	RNA binding	Molecular Function	IDA[16946708]	104
GO:0005515	protein binding	Molecular Function	IPI[16946708]	910
GO:0005634	nucleus	Cellular Component		770
GO:0005654	nucleoplasm	Cellular Component		183
GO:0005730	nucleolus	Cellular Component		243

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with HNRNPH1 (count: 93)

Gene Symbol	Pathway Count	Pathway List
HNRNPA2B1	11	catalytic step 2 spliceosome; gene expression; RNA splicing; cytoplasm; nucleotide binding; mRNA splicing, via spliceosome; RNA binding; protein binding; nucleus; nucleoplasm; nucleolus;
HNRNPA1	10	catalytic step 2 spliceosome; gene expression; RNA splicing; cytoplasm; nucleotide binding; mRNA splicing, via spliceosome; RNA binding; nucleus; nucleoplasm; nucleolus;
U2AF1	10	catalytic step 2 spliceosome; gene expression; RNA splicing; nucleotide binding; mRNA splicing, via spliceosome; RNA binding; protein binding; nucleus; nucleoplasm; nucleolus;
FUS	10	gene expression; RNA splicing; cytoplasm; nucleotide binding; mRNA splicing, via spliceosome; RNA binding; protein binding; nucleus; nucleoplasm; nucleolus;
EFTUD2	9	catalytic step 2 spliceosome; gene expression; RNA splicing; cytoplasm; mRNA splicing, via spliceosome; protein binding; nucleus; nucleoplasm; nucleolus;
SF3A1	9	catalytic step 2 spliceosome; gene expression; RNA splicing; mRNA splicing, via spliceosome; RNA binding; protein binding; nucleus; nucleoplasm; nucleolus;
RBM4	9	RNA splicing; cytoplasm; RNA processing; nucleotide binding; RNA binding; protein binding; nucleus; nucleoplasm; nucleolus;
DDX23	8	catalytic step 2 spliceosome; gene expression; RNA splicing; mRNA splicing, via spliceosome; protein binding; nucleus; nucleoplasm; nucleolus;
DHX8	8	catalytic step 2 spliceosome; RNA splicing; RNA processing; mRNA splicing, via spliceosome; RNA binding; protein binding; nucleus; nucleolus;
HNRNPC	8	catalytic step 2 spliceosome; gene expression; RNA splicing; nucleotide binding; mRNA splicing, via spliceosome; RNA binding; protein binding; nucleoplasm;
PRPF6	8	catalytic step 2 spliceosome; gene expression; RNA splicing; mRNA splicing, via spliceosome; RNA binding; protein binding; nucleus; nucleoplasm;
SF3A3	8	catalytic step 2 spliceosome; gene expression; RNA splicing; mRNA splicing, via spliceosome; protein binding; nucleus; nucleoplasm; nucleolus;
SNRNP200	8	catalytic step 2 spliceosome; gene expression; RNA splicing; mRNA splicing, via spliceosome; protein binding; nucleus; nucleoplasm; nucleolus;
SNRPD1	8	catalytic step 2 spliceosome; gene expression; RNA splicing; mRNA splicing, via spliceosome; RNA binding; protein binding; nucleus; nucleoplasm;
CPSF7	8	gene expression; RNA splicing; nucleotide binding; mRNA splicing, via spliceosome; RNA binding; protein binding; nucleus; nucleoplasm;
DHX9	8	gene expression; RNA splicing; cytoplasm; mRNA splicing, via spliceosome; protein binding; nucleus; nucleoplasm; nucleolus;
PRPF4	8	gene expression; RNA splicing; RNA processing; mRNA splicing, via spliceosome; protein binding; nucleus; nucleoplasm; nucleolus;
SMC1A	8	gene expression; RNA splicing; cytoplasm; mRNA splicing, via spliceosome; protein binding; nucleus; nucleoplasm; nucleolus;
RBFOX1	7	regulation of RNA splicing; RNA splicing; cytoplasm; nucleotide binding; RNA binding; protein binding; nucleus;
PRPF8	7	catalytic step 2 spliceosome; gene expression; RNA splicing; mRNA splicing, via spliceosome; RNA binding; protein binding; nucleoplasm;
SART1	7	catalytic step 2 spliceosome; cytoplasm; mRNA splicing, via spliceosome; protein binding; nucleus; nucleoplasm; nucleolus;
SF3B2	7	catalytic step 2 spliceosome; gene expression; RNA splicing; mRNA splicing, via spliceosome; nucleus; nucleoplasm; nucleolus;
SNRPA1	7	catalytic step 2 spliceosome; gene expression; RNA splicing; mRNA splicing, via spliceosome; RNA binding; protein binding; nucleoplasm;
SNRPB2	7	catalytic step 2 spliceosome; gene expression; RNA splicing; nucleotide binding; mRNA splicing, via spliceosome; protein binding; nucleoplasm;
SNRPG	7	catalytic step 2 spliceosome; gene expression; RNA splicing; mRNA splicing, via spliceosome; RNA binding; protein binding; nucleoplasm;
SNW1	7	catalytic step 2 spliceosome; gene expression; mRNA splicing, via spliceosome; protein binding; nucleus; nucleoplasm; nucleolus;
CD2BP2	7	gene expression; RNA splicing; cytoplasm; mRNA splicing, via spliceosome; protein binding; nucleus; nucleoplasm;
NCBP1	7	gene expression; RNA splicing; mRNA splicing, via spliceosome; RNA binding; protein binding; nucleus; nucleoplasm;
SF3B4	7	gene expression; RNA splicing; nucleotide binding; mRNA splicing, via spliceosome; RNA binding; protein binding; nucleoplasm;
SNRPA	7	gene expression; RNA splicing; nucleotide binding; mRNA splicing, via spliceosome; RNA binding; protein binding; nucleoplasm;
U2AF2	7	gene expression; RNA splicing; nucleotide binding; mRNA splicing, via spliceosome; RNA binding; protein binding; nucleoplasm;
ATXN1	7	poly(U) RNA binding; cytoplasm; RNA processing; protein binding; nucleus; nucleoplasm; nucleolus;
CELF1	6	regulation of RNA splicing; cytoplasm; nucleotide binding; RNA binding; protein binding; nucleus;
SNRPB	6	catalytic step 2 spliceosome; gene expression; RNA splicing; mRNA splicing, via spliceosome; protein binding; nucleoplasm;
SNRPD2	6	catalytic step 2 spliceosome; gene expression; RNA splicing; mRNA splicing, via spliceosome; protein binding; nucleoplasm;
SNRPD3	6	catalytic step 2 spliceosome; gene expression; RNA splicing; mRNA splicing, via spliceosome; protein binding; nucleoplasm;
SNRPF	6	catalytic step 2 spliceosome; gene expression; RNA splicing; mRNA splicing, via spliceosome; RNA binding; nucleoplasm;
CPSF3	6	gene expression; RNA splicing; mRNA splicing, via spliceosome; RNA binding; protein binding; nucleoplasm;
DGCR8	6	gene expression; cytoplasm; protein binding; nucleus; nucleoplasm; nucleolus;
MEN1	6	gene expression; cytoplasm; protein binding; nucleus; nucleoplasm; nucleolus;
PGR	6	gene expression; cytoplasm; protein binding; nucleus; nucleoplasm; nucleolus;
POLR2G	6	gene expression; RNA splicing; mRNA splicing, via spliceosome; RNA binding; nucleus; nucleoplasm;
RBPJ	6	gene expression; cytoplasm; protein binding; nucleus; nucleoplasm; nucleolus;
SSRP1	6	gene expression; cytoplasm; protein binding; nucleus; nucleoplasm; nucleolus;
XPO1	6	gene expression; cytoplasm; RNA binding; protein binding; nucleoplasm; nucleolus;
TARDBP	6	RNA splicing; nucleotide binding; RNA binding; protein binding; nucleus; nucleolus;
LARP7	6	cytoplasm; RNA processing; nucleotide binding; RNA binding; nucleus; nucleoplasm;
NOL8	6	cytoplasm; nucleotide binding; RNA binding; protein binding; nucleus; nucleolus;
PSPC1	6	cytoplasm; nucleotide binding; RNA binding; protein binding; nucleus; nucleolus;
CDC40	5	catalytic step 2 spliceosome; gene expression; RNA splicing; mRNA splicing, via spliceosome; nucleoplasm;
CWC15	5	catalytic step 2 spliceosome; mRNA splicing, via spliceosome; RNA binding; protein binding; nucleus;
PRPF19	5	catalytic step 2 spliceosome; cytoplasm; mRNA splicing, via spliceosome; protein binding; nucleus;
SF3A2	5	catalytic step 2 spliceosome; gene expression; RNA splicing; mRNA splicing, via spliceosome; nucleoplasm;
SF3B3	5	catalytic step 2 spliceosome; gene expression; RNA splicing; mRNA splicing, via spliceosome; nucleoplasm;
SLU7	5	catalytic step 2 spliceosome; cytoplasm; mRNA splicing, via spliceosome; nucleus; nucleolus;
DCPS	5	gene expression; cytoplasm; protein binding; nucleus; nucleolus;
HSPA8	5	gene expression; RNA splicing; protein binding; nucleus; nucleolus;
IARS	5	gene expression; cytoplasm; protein binding; nucleus; nucleolus;
MAML1	5	gene expression; protein binding; nucleus; nucleoplasm; nucleolus;
MAPK3	5	gene expression; protein binding; nucleus; nucleoplasm; nucleolus;
MED1	5	gene expression; protein binding; nucleus; nucleoplasm; nucleolus;
MED4	5	gene expression; protein binding; nucleus; nucleoplasm; nucleolus;
NCOR1	5	gene expression; cytoplasm; protein binding; nucleus; nucleoplasm;
NCOR2	5	gene expression; protein binding; nucleus; nucleoplasm; nucleolus;
NEDD4L	5	gene expression; cytoplasm; protein binding; nucleus; nucleoplasm;
NR4A2	5	gene expression; cytoplasm; protein binding; nucleus; nucleoplasm;
PSMC3	5	gene expression; cytoplasm; protein binding; nucleus; nucleoplasm;
TAF10	5	gene expression; cytoplasm; protein binding; nucleus; nucleoplasm;
TAF13	5	gene expression; protein binding; nucleus; nucleoplasm; nucleolus;
TAF4B	5	gene expression; cytoplasm; nucleus; nucleoplasm; nucleolus;
TXNL4A	5	gene expression; RNA splicing; mRNA splicing, via spliceosome; protein binding; nucleoplasm;
YAP1	5	gene expression; cytoplasm; protein binding; nucleus; nucleoplasm;
BAIAP2	5	actin cytoskeleton; cytoplasm; protein binding; nucleus; nucleolus;
KLHL20	5	actin cytoskeleton; cytoplasm; protein binding; nucleus; nucleolus;
NOVA1	5	RNA splicing; RNA processing; mRNA splicing, via spliceosome; RNA binding; nucleus;
SCAF8	5	RNA splicing; nucleotide binding; RNA binding; nucleus; nucleolus;
SMNDC1	5	RNA splicing; cytoplasm; RNA binding; protein binding; nucleus;
ALKBH8	5	cytoplasm; RNA binding; protein binding; nucleus; nucleolus;
ATXN2	5	cytoplasm; RNA binding; protein binding; nucleus; nucleolus;
CHD1L	5	cytoplasm; nucleotide binding; protein binding; nucleus; nucleolus;
IGF2BP3	5	cytoplasm; nucleotide binding; RNA binding; protein binding; nucleus;
MAPK1	5	cytoplasm; protein binding; nucleus; nucleoplasm; nucleolus;
MPHOSPH6	5	cytoplasm; RNA binding; protein binding; nucleus; nucleolus;
NUMA1	5	cytoplasm; protein binding; nucleus; nucleoplasm; nucleolus;
PDCD4	5	cytoplasm; RNA binding; protein binding; nucleus; nucleolus;
RAD23B	5	cytoplasm; protein binding; nucleus; nucleoplasm; nucleolus;
RAD9A	5	cytoplasm; protein binding; nucleus; nucleoplasm; nucleolus;
RCC1	5	cytoplasm; protein binding; nucleus; nucleoplasm; nucleolus;
RFWD2	5	cytoplasm; protein binding; nucleus; nucleoplasm; nucleolus;
XRCC5	5	cytoplasm; protein binding; nucleus; nucleoplasm; nucleolus;
ZFR	5	cytoplasm; RNA binding; protein binding; nucleus; nucleolus;
RBM14	5	nucleotide binding; RNA binding; protein binding; nucleus; nucleolus;
SETD1A	5	nucleotide binding; RNA binding; protein binding; nucleus; nucleolus;

Genes shared at least 2 KEGG pathways with HNRNPH1 (count: 0)

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Region: chr5:179041179..179061785 View in gBrowse