ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

Gene Report

Basic Info
Approved Symbol ATXN2
Previous Symbol SCA2, TNRC13
Symbol Alias ATX2
Approved Name ataxin 2
Previous Name "spinocerebellar ataxia 2 (olivopontocerebellar ataxia 2, autosomal dominant, ataxin 2)"
Name Alias "trinucleotide repeat containing 13"
Location 12q23-q24.1
Position chr12:111890018-112037480, -1
External Links HGNC: 10555
Entrez Gene: 6311
Ensembl: ENSG00000204842
UCSC: uc001tsj.3
No. of Studies 1 (significant: 0; non-significant: 0; trend: 1)
Source Literature-origin; Mapped by Literature SNP

Gene related studies (count: 1)
Reference Statistical Values/Author Comments Result of Statistical Analysis
Stergiakouli E., 2012 One of the top 20 independent SNPs with P=0.00000862 locates intronic relative to this gene. Trend

Gene related SNPs (count: 34)

Literature-origin SNPs (count: 1)

LD-proxies (count: 33)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 25)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 25)

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with ATXN2 (count: 50)

Genes shared at least 2 KEGG pathways with ATXN2 (count: 0)

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Region: chr12:111890018..112037480 View in gBrowse
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