ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	SNRPG
Symbol Alias	Sm-G
Approved Name	small nuclear ribonucleoprotein polypeptide G
Location	2p13.3
Position	chr2:70508494-70520903, -
External Links	HGNC: 11163 Entrez Gene: 6637 Ensembl: ENSG00000143977 UCSC: uc002sgp.2
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by PBA pathway

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 20)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 1)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0005681	spliceosomal complex	Cellular Component	TAS[7744013]	51

GO terms by database search (count: 19)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0005654	nucleoplasm	Cellular Component		183
GO:0005515	protein binding	Molecular Function	IPI[14603251]	910
GO:0005683	U7 snRNP	Cellular Component	IDA[11574479]	5
GO:0000387	spliceosomal snRNP assembly	Biological Process		10
GO:0000245	spliceosomal complex assembly	Biological Process	NAS[7744013]	8
GO:0003723	RNA binding	Molecular Function		104
GO:0000398	mRNA splicing, via spliceosome	Biological Process	IC[11991638]	54
GO:0008380	RNA splicing	Biological Process		65
GO:0010467	gene expression	Biological Process		140
GO:0006397	mRNA processing	Biological Process		50
GO:0008334	histone mRNA metabolic process	Biological Process		6
GO:0006366	transcription from RNA polymerase II promoter	Biological Process		62
GO:0006369	termination of RNA polymerase II transcription	Biological Process		14
GO:0005689	U12-type spliceosomal complex	Cellular Component	IDA[15146077]	16
GO:0005829	cytosol	Cellular Component		447
GO:0034660	ncRNA metabolic process	Biological Process		8
GO:0071013	catalytic step 2 spliceosome	Cellular Component	IDA[11991638]	31
GO:0016070	RNA metabolic process	Biological Process		46
GO:0030532	small nuclear ribonucleoprotein complex	Cellular Component	NAS[7744013]	12

Gene related KEGG pathways (count: 1)

ID	Name	No. of Genes in ADHDgene	Brief Description
hsa03040	Spliceosome	47	After transcription, eukaryotic mRNA precursors contain prot...... After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified. More...

Genes shared at least 5 GO terms with SNRPG (count: 66)

Gene Symbol	Pathway Count	Pathway List
SNRPB	18	nucleoplasm; protein binding; U7 snRNP; spliceosomal complex; spliceosomal snRNP assembly; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; histone mRNA metabolic process; transcription from RNA polymerase II promoter; termination of RNA polymerase II transcription; U12-type spliceosomal complex; cytosol; ncRNA metabolic process; catalytic step 2 spliceosome; RNA metabolic process; small nuclear ribonucleoprotein complex;
SNRPD3	18	nucleoplasm; protein binding; U7 snRNP; spliceosomal complex; spliceosomal snRNP assembly; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; histone mRNA metabolic process; transcription from RNA polymerase II promoter; termination of RNA polymerase II transcription; U12-type spliceosomal complex; cytosol; ncRNA metabolic process; catalytic step 2 spliceosome; RNA metabolic process; small nuclear ribonucleoprotein complex;
SNRPF	18	nucleoplasm; U7 snRNP; spliceosomal complex; spliceosomal snRNP assembly; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; histone mRNA metabolic process; transcription from RNA polymerase II promoter; termination of RNA polymerase II transcription; U12-type spliceosomal complex; cytosol; ncRNA metabolic process; catalytic step 2 spliceosome; RNA metabolic process; small nuclear ribonucleoprotein complex;
NCBP1	14	nucleoplasm; protein binding; spliceosomal snRNP assembly; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; histone mRNA metabolic process; transcription from RNA polymerase II promoter; termination of RNA polymerase II transcription; cytosol; ncRNA metabolic process; RNA metabolic process;
SNRPD1	14	nucleoplasm; protein binding; spliceosomal snRNP assembly; spliceosomal complex assembly; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression; U12-type spliceosomal complex; cytosol; ncRNA metabolic process; catalytic step 2 spliceosome; RNA metabolic process; small nuclear ribonucleoprotein complex;
SNRPD2	14	nucleoplasm; protein binding; spliceosomal complex; spliceosomal snRNP assembly; spliceosomal complex assembly; mRNA splicing, via spliceosome; RNA splicing; gene expression; U12-type spliceosomal complex; cytosol; ncRNA metabolic process; catalytic step 2 spliceosome; RNA metabolic process; small nuclear ribonucleoprotein complex;
U2AF1	11	nucleoplasm; protein binding; spliceosomal complex; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; transcription from RNA polymerase II promoter; termination of RNA polymerase II transcription; catalytic step 2 spliceosome;
U2AF2	10	nucleoplasm; protein binding; spliceosomal complex; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; transcription from RNA polymerase II promoter; termination of RNA polymerase II transcription;
CPSF3	9	nucleoplasm; protein binding; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; transcription from RNA polymerase II promoter; termination of RNA polymerase II transcription;
CPSF7	9	nucleoplasm; protein binding; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; transcription from RNA polymerase II promoter; termination of RNA polymerase II transcription;
HNRNPA2B1	9	nucleoplasm; protein binding; spliceosomal complex; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; catalytic step 2 spliceosome;
PRPF6	9	nucleoplasm; protein binding; spliceosomal complex; spliceosomal complex assembly; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression; catalytic step 2 spliceosome;
PRPF8	9	nucleoplasm; protein binding; spliceosomal complex; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; catalytic step 2 spliceosome;
SF3A1	9	nucleoplasm; protein binding; spliceosomal complex; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; catalytic step 2 spliceosome;
SF3B3	9	nucleoplasm; spliceosomal complex; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; U12-type spliceosomal complex; catalytic step 2 spliceosome; small nuclear ribonucleoprotein complex;
SF3B4	9	nucleoplasm; protein binding; spliceosomal complex; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; U12-type spliceosomal complex;
SNRPA1	9	nucleoplasm; protein binding; spliceosomal complex; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression; catalytic step 2 spliceosome; small nuclear ribonucleoprotein complex;
LSM4	9	protein binding; spliceosomal complex; RNA binding; RNA splicing; gene expression; mRNA processing; cytosol; RNA metabolic process; small nuclear ribonucleoprotein complex;
CDC40	8	nucleoplasm; spliceosomal complex; mRNA splicing, via spliceosome; RNA splicing; gene expression; transcription from RNA polymerase II promoter; termination of RNA polymerase II transcription; catalytic step 2 spliceosome;
EFTUD2	8	nucleoplasm; protein binding; spliceosomal complex; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; catalytic step 2 spliceosome;
HNRNPA1	8	nucleoplasm; spliceosomal complex; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; catalytic step 2 spliceosome;
HNRNPC	8	nucleoplasm; protein binding; spliceosomal complex; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression; catalytic step 2 spliceosome;
LSM11	8	nucleoplasm; protein binding; U7 snRNP; gene expression; mRNA processing; histone mRNA metabolic process; transcription from RNA polymerase II promoter; termination of RNA polymerase II transcription;
SF3A2	8	nucleoplasm; spliceosomal complex; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; catalytic step 2 spliceosome; small nuclear ribonucleoprotein complex;
SF3A3	8	nucleoplasm; protein binding; spliceosomal complex; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; catalytic step 2 spliceosome;
SF3B2	8	nucleoplasm; spliceosomal complex; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; U12-type spliceosomal complex; catalytic step 2 spliceosome;
SNRPB2	8	nucleoplasm; protein binding; spliceosomal complex; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; catalytic step 2 spliceosome;
CLP1	7	nucleoplasm; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; transcription from RNA polymerase II promoter; termination of RNA polymerase II transcription;
DDX23	7	nucleoplasm; protein binding; spliceosomal complex; mRNA splicing, via spliceosome; RNA splicing; gene expression; catalytic step 2 spliceosome;
HNRNPH1	7	nucleoplasm; protein binding; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression; catalytic step 2 spliceosome;
PCF11	7	nucleoplasm; mRNA splicing, via spliceosome; RNA splicing; gene expression; mRNA processing; transcription from RNA polymerase II promoter; termination of RNA polymerase II transcription;
SNRNP200	7	nucleoplasm; protein binding; spliceosomal complex; mRNA splicing, via spliceosome; RNA splicing; gene expression; catalytic step 2 spliceosome;
SNRPA	7	nucleoplasm; protein binding; spliceosomal complex; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression;
TXNL4A	7	nucleoplasm; protein binding; spliceosomal complex; spliceosomal complex assembly; mRNA splicing, via spliceosome; RNA splicing; gene expression;
HSPA8	7	protein binding; spliceosomal complex; RNA splicing; gene expression; mRNA processing; cytosol; RNA metabolic process;
FUS	6	nucleoplasm; protein binding; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression;
PHF5A	6	nucleoplasm; spliceosomal complex; mRNA splicing, via spliceosome; RNA splicing; gene expression; U12-type spliceosomal complex;
POLR2G	6	nucleoplasm; RNA binding; mRNA splicing, via spliceosome; RNA splicing; gene expression; transcription from RNA polymerase II promoter;
PRPF4	6	nucleoplasm; protein binding; spliceosomal complex; mRNA splicing, via spliceosome; RNA splicing; gene expression;
SART1	6	nucleoplasm; protein binding; spliceosomal snRNP assembly; mRNA splicing, via spliceosome; cytosol; catalytic step 2 spliceosome;
SNW1	6	nucleoplasm; protein binding; spliceosomal complex; mRNA splicing, via spliceosome; gene expression; catalytic step 2 spliceosome;
XPO1	6	nucleoplasm; protein binding; RNA binding; gene expression; cytosol; RNA metabolic process;
ZCRB1	6	nucleoplasm; spliceosomal complex; RNA binding; RNA splicing; mRNA processing; U12-type spliceosomal complex;
CLNS1A	6	protein binding; spliceosomal snRNP assembly; gene expression; cytosol; ncRNA metabolic process; RNA metabolic process;
DHX8	6	protein binding; spliceosomal complex; RNA binding; mRNA splicing, via spliceosome; RNA splicing; catalytic step 2 spliceosome;
ZRSR2	6	protein binding; spliceosomal complex; spliceosomal complex assembly; mRNA splicing, via spliceosome; RNA splicing; U12-type spliceosomal complex;
CD2BP2	5	nucleoplasm; protein binding; mRNA splicing, via spliceosome; RNA splicing; gene expression;
DHX9	5	nucleoplasm; protein binding; mRNA splicing, via spliceosome; RNA splicing; gene expression;
PSMB7	5	nucleoplasm; protein binding; gene expression; cytosol; RNA metabolic process;
PSMC3	5	nucleoplasm; protein binding; gene expression; cytosol; RNA metabolic process;
PSMD5	5	nucleoplasm; protein binding; gene expression; cytosol; RNA metabolic process;
PSMD7	5	nucleoplasm; protein binding; gene expression; cytosol; RNA metabolic process;
RBM4	5	nucleoplasm; protein binding; RNA binding; RNA splicing; mRNA processing;
SMC1A	5	nucleoplasm; protein binding; mRNA splicing, via spliceosome; RNA splicing; gene expression;
TCEB1	5	nucleoplasm; protein binding; gene expression; transcription from RNA polymerase II promoter; cytosol;
UBB	5	nucleoplasm; protein binding; gene expression; cytosol; RNA metabolic process;
UBC	5	nucleoplasm; protein binding; gene expression; cytosol; RNA metabolic process;
CNOT6	5	protein binding; RNA binding; gene expression; cytosol; RNA metabolic process;
CWC15	5	protein binding; spliceosomal complex; RNA binding; mRNA splicing, via spliceosome; catalytic step 2 spliceosome;
DDX6	5	protein binding; RNA binding; gene expression; cytosol; RNA metabolic process;
PATL1	5	protein binding; RNA binding; gene expression; cytosol; RNA metabolic process;
RPL13	5	protein binding; RNA binding; gene expression; cytosol; RNA metabolic process;
RPL14	5	protein binding; RNA binding; gene expression; cytosol; RNA metabolic process;
SMNDC1	5	protein binding; spliceosomal complex; RNA binding; RNA splicing; mRNA processing;
SNRPN	5	protein binding; spliceosomal complex; RNA binding; RNA splicing; small nuclear ribonucleoprotein complex;
TARDBP	5	protein binding; RNA binding; RNA splicing; mRNA processing; transcription from RNA polymerase II promoter;

Genes shared at least 2 KEGG pathways with SNRPG (count: 0)

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Region: chr2:70508494..70520903 View in gBrowse