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- Data Summary
Gene Report
Approved Symbol | ADRA2A |
---|---|
Previous Symbol | ADRA2, ADRA2R |
Symbol Alias | ADRAR |
Approved Name | adrenergic, alpha-2A-, receptor |
Name Alias | alpha-2AAR subtype C10, " alpha-2A-adrenergic receptor" |
Location | 10q24-q26 |
Position | chr10:112836790-112840665, + |
External Links |
HGNC: 281 Entrez Gene: 150 Ensembl: ENSG00000150594 UCSC: uc001kzo.2 |
No. of Studies | 12 (significant: 4; non-significant: 8; trend: 0) |
Source | Literature-origin; Mapped by LD-proxy; Mapped by literature SNP |
Reference | Statistical Values/Author Comments | Result of Statistical Analysis |
---|---|---|
Gizer IR, 2009 | The present study does not support a relation between ADHD and this gene. | Non-significant |
Cho SC, 2008(b) | C allele of ADRA2A DraI polymorphism showed preferential transmission; haplotype C/C P-value=0.051, X2=3.80; a trend of over-transmission of haplotype C/C was observed | Significant |
Hawi, Z., 2012 | This gene did not show significant association with ADHD. | Non-significant |
de Cerqueira CC, 2011 | chi-square test P-value=0.080, X2=5.044 for three-marker haplotype frequencies, which showed no significant differences between patients and controls | Non-significant |
Xu C, 2001 | no evidence for linkage of the ADRA2A gene with ADHD was found using the transmission disequilibrium test in this set of families | Non-significant |
Roman T, 2003 | there was no evidence of association between the ADRA2A MspI variant and the disorder, but effects of the ADRA2A gene on inattention and combined symptom scores were detected | Non-significant |
Park L, 2005 | haplotype 212 (rarer alleles of the DraI and MspI RFLPs, and the common allele of the HhaI RFLP) TDT P-value=0.013, X2=6.23, RR=5.50 in ADHD-C; TDT P-value=0.011, X2=6.55, RR=3.40 in ADHD-(C+PI); supported the hypothesis that an allele of the ADRA2A gene is associated and linked with the ADHD combined subtype | Significant |
Bobb AJ, 2005 | no polymorphism was associated with ADHD | Non-significant |
Wang B, 2006 | haplotype M (C allele)/C of MspI/DraI, P-value=0.072, X2 (1df)=3.233 with the ADHD-C subtype; weak evidence for a possible role of ADRA2A | Non-significant |
Schmitz M, 2006 | CC+CG genotypes, P-value=0.02, OR=3.78, ADRA2A may be associated with ADHD inattentive type | Significant |
Brookes K, 2006 | UNPHASED TDT P-value=0.141, global P-value=0.505, WHAP TDT P_sum P-value=0.88, no SNP with nominal P-value<0.05 located in this gene | Non-significant |
Deupree JD, 2006 | HhaI-DraI haplotype 1 1 (GC), TDT P-value=0.035, sigma2 (1df) =4.45; MspI-HhaI-DraI haplotype 1 1 1 or CGC, TDT P-value=0.046, sigma2 (1df) =4.00; ADRA2A may play a role in ADHD | Significant |
Literature-origin SNPs (count: 7)
rs_ID | Location | Functional Annotation | No. of Studies (significant/non-significant/trend) |
---|---|---|---|
rs180045 | Chr5:178639086(Fwd) | intron_variant | 1(0/1/0) |
rs553668 | Chr10:112839579(Fwd) | 3_prime_UTR_variant | 3(1/2/0) |
rs521674 | Chr10:112835590(Fwd) | upstream_gene_variant | 1(0/1/0) |
rs583668 | Chr16:33967254(Fwd); Chr2:133009053(Rev); ChrY:10039596(Fwd) | downstream_gene_variant(ENST00000515896;ENST00000365304;ENST00000363564) | intron_variant(ENST00000470729) | nc_transcript_variant(ENST00000470729) | upstream_gene_variant(ENST00000445125;ENST00000539813) | 3(2/1/0) |
rs1800544 | Chr10:112836503(Fwd) | upstream_gene_variant | 11(1/10/0) |
rs1800545 | Chr10:112837538(Fwd) | 5_prime_UTR_variant | 3(1/2/0) |
rs602618 | Chr10:112843085(Fwd) | downstream_gene_variant | 1(0/1/0) |
LD-proxies (count: 1)
rs_ID | Location | Functional Annotation |
---|---|---|
rs638019 | Chr10:112831829(Fwd) | upstream_gene_variant |
GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)
GO terms by database search (count: 63)
ID | Name | No. of Genes in ADHDgene | Brief Description |
---|---|---|---|
hsa04080 | Neuroactive ligand-receptor interaction | 93 |
Region: chr10:112836790..112840665 View in gBrowse
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014