ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs1800544 dbSNP Ensembl
Location Chr10:112836503(Fwd)
Variant Alleles G/C
Ancestral Allele G
Functional Annotation upstream_gene_variant.
Consequence to Transcript upstream_gene_variant(ENST00000280155)
No. of Studies 11 (significant: 1; non-significant: 10; trend: 0)
Source Literature-origin

SNP related studies (count: 11)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Wang B, 2006 M/m TDT P-value=0.949, McNemar X2=0.004 for ADHD phen...... TDT P-value=0.949, McNemar X2=0.004 for ADHD phenotype; TDT P-value=0.213, McNemar X2=1.548 for ADHD-C phenotype; TDT P-value=0.664 for ADHD-HI phenotype; TDT P-value=0.542, McNemar X2=0.371 for ADHD-I phenotype More... no biased transmission of any allele was observed no biased transmission of any allele was observed Non-significant
Schmitz M, 2006 CC+CG genotypes; P-value=0.02; OR=3.78 CC+CG genotypes; P-value=0.02; OR=3.78 G allele increased the risk for ADHD-I compared with other g...... G allele increased the risk for ADHD-I compared with other genotypes More... Significant
Park L, 2005 C/G TDT P-value=0.13, X2=2.33, RR=2 for G allele in A...... TDT P-value=0.13, X2=2.33, RR=2 for G allele in ADHD-C; TDT P-value=0.41, X2=0.69, RR=1.6 for G allele in ADHD-PI; TDT P-value=0.086, X2=2.94, RR=1.83 for G allele in ADHD-(C+PI) More... transmission of the G allele approached significance in the ...... transmission of the G allele approached significance in the ADHD-(C+PI) group More... Non-significant
Roman T, 2003 m/M allelic HRR P-value=0.16, X2=2.01 allelic HRR P-value=0.16, X2=2.01 there was no evidence of association between the ADRA2A MspI...... there was no evidence of association between the ADRA2A MspI variant and the disorder More... Non-significant
Hawi, Z., 2012 C:G C P-value=0.3865, X2=0.75, OR=1.13, 95% CI=0.85-1.5...... P-value=0.3865, X2=0.75, OR=1.13, 95% CI=0.85-1.50 More... The marker did not show significant association with ADHD. The marker did not show significant association with ADHD. Non-significant
Deupree JD, 2006 C/G FBAT P-value=0.145 for the affected, FBAT P-value=0.57 for t...... FBAT P-value=0.145 for the affected, FBAT P-value=0.57 for the hyperactive, FBAT P-value=0.281 for the inattentive, FBAT P-value=0.658 for the total sample, with the additive model; TDT P-value=0.327, sigma2 (1df) =0.96 for allele 1 More... showed no significant association showed no significant association Non-significant
Bobb AJ, 2005 allelic TDT P-value=0.05, OR=1.41 in case-control analysis; ...... allelic TDT P-value=0.05, OR=1.41 in case-control analysis; allelic TDT P-value=0.37, RR=1.26 in family-based analysis More... non-significant association non-significant association Non-significant
Xu C, 2001 m/M allelic ETDT P-value=0.45, X2=0.56 allelic ETDT P-value=0.45, X2=0.56 TDT analysis yielded no evidence for preferential transmissi...... TDT analysis yielded no evidence for preferential transmission of either allele More... Non-significant
Gizer IR, 2009 Meta-analysis model: Random: OR=0.99, 95% CI=0.89-1.11, P-va...... Meta-analysis model: Random: OR=0.99, 95% CI=0.89-1.11, P-value=0.542; Q-statistic: P-value=0.272, I2=18 More... no evidence to suggest an association between this polymorph...... no evidence to suggest an association between this polymorphisms and ADHD More... Non-significant
de Cerqueira CC, 2011 C/G chi-square test P-value=0.464, X2=0.536 for allel...... chi-square test P-value=0.464, X2=0.536 for allele frequencies; chi-square test P-value=0.695, X2=0.729 for genotype frequencies More... no significant differences in allele and genotype frequencie...... no significant differences in allele and genotype frequencies were found between patients and controls in this study More... Non-significant
Cho SC, 2008(b) genotype or allele frequencies P-value>0.05 genotype or allele frequencies P-value>0.05 no significant differences in the genotype or allele frequen...... no significant differences in the genotype or allele frequencies of the ADRA2A MspI and DraI polymorphisms between the ADHD and control groups More... Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs1800544 (count: 0) View in gBrowse (chr10:112836503..112836503 )

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014