ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	RPS9
Symbol Alias	S9
Approved Name	ribosomal protein S9
Name Alias	40S ribosomal protein S9
Location	19q13.4
Position	chr19:54704610-54752862, +
External Links	HGNC: 10442 Entrez Gene: 6203 Ensembl: ENSG00000170889 UCSC: uc002qdx.2
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by CNV

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 1)

ID	Location	Size	Band	Type	Inheritance
CNV_Elia[2012]_17	chr19:59423491-59428132 (NCBI36 / hg18)	4642	19q13.42	Dup

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 25)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 25)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Biological Process		16
GO:0003735	structural constituent of ribosome	Molecular Function		24
GO:0005840	ribosome	Cellular Component	NAS[7772601]	12
GO:0006412	translation	Biological Process	IC[8706699]; IMP[18420587]	42
GO:0006413	translational initiation	Biological Process		14
GO:0006414	translational elongation	Biological Process		16
GO:0005515	protein binding	Molecular Function		910
GO:0005730	nucleolus	Cellular Component	IDA[18420587]	243
GO:0005737	cytoplasm	Cellular Component	IDA[18420587]	690
GO:0005829	cytosol	Cellular Component		447
GO:0016032	viral reproduction	Biological Process		57
GO:0010467	gene expression	Biological Process		140
GO:0016071	mRNA metabolic process	Biological Process		34
GO:0016070	RNA metabolic process	Biological Process		46
GO:0006417	regulation of translation	Biological Process	IMP[18420587]	10
GO:0006415	translational termination	Biological Process		13
GO:0008284	positive regulation of cell proliferation	Biological Process	IMP[18420587]	69
GO:0006614	SRP-dependent cotranslational protein targeting to membrane	Biological Process		18
GO:0044267	cellular protein metabolic process	Biological Process		64
GO:0030529	ribonucleoprotein complex	Cellular Component	IDA[17289661]	23
GO:0045182	translation regulator activity	Molecular Function	IMP[18420587]	2
GO:0019083	viral transcription	Biological Process		13
GO:0019058	viral infectious cycle	Biological Process		15
GO:0022627	cytosolic small ribosomal subunit	Cellular Component	IDA[8706699]	6
GO:0019843	rRNA binding	Molecular Function		4

Gene related KEGG pathways (count: 1)

ID	Name	No. of Genes in ADHDgene	Brief Description
hsa03010	Ribosome	14

Genes shared at least 5 GO terms with RPS9 (count: 50)

Gene Symbol	Pathway Count	Pathway List
RPS25	19	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; ribosome; translation; translational initiation; translational elongation; nucleolus; cytoplasm; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process; translational termination; SRP-dependent cotranslational protein targeting to membrane; cellular protein metabolic process; viral transcription; viral infectious cycle; cytosolic small ribosomal subunit;
RPS3	19	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; translation; translational initiation; translational elongation; protein binding; cytoplasm; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process; translational termination; SRP-dependent cotranslational protein targeting to membrane; cellular protein metabolic process; ribonucleoprotein complex; viral transcription; viral infectious cycle; cytosolic small ribosomal subunit;
RPS15A	18	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; translation; translational initiation; translational elongation; cytoplasm; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process; translational termination; positive regulation of cell proliferation; SRP-dependent cotranslational protein targeting to membrane; cellular protein metabolic process; viral transcription; viral infectious cycle; cytosolic small ribosomal subunit;
RPL14	17	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; translation; translational initiation; translational elongation; protein binding; cytoplasm; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process; translational termination; SRP-dependent cotranslational protein targeting to membrane; cellular protein metabolic process; viral transcription; viral infectious cycle;
RPL35	17	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; translation; translational initiation; translational elongation; nucleolus; cytoplasm; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process; translational termination; SRP-dependent cotranslational protein targeting to membrane; cellular protein metabolic process; viral transcription; viral infectious cycle;
FAU	16	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; translation; translational initiation; translational elongation; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process; translational termination; SRP-dependent cotranslational protein targeting to membrane; cellular protein metabolic process; viral transcription; viral infectious cycle; cytosolic small ribosomal subunit;
RPL13	16	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; translation; translational initiation; translational elongation; protein binding; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process; translational termination; SRP-dependent cotranslational protein targeting to membrane; cellular protein metabolic process; viral transcription; viral infectious cycle;
RPL37	16	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; translation; translational initiation; translational elongation; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process; translational termination; SRP-dependent cotranslational protein targeting to membrane; cellular protein metabolic process; viral transcription; viral infectious cycle; rRNA binding;
RPS12	16	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; translation; translational initiation; translational elongation; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process; translational termination; SRP-dependent cotranslational protein targeting to membrane; cellular protein metabolic process; viral transcription; viral infectious cycle; cytosolic small ribosomal subunit;
RPL12	15	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; translation; translational initiation; translational elongation; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process; translational termination; SRP-dependent cotranslational protein targeting to membrane; cellular protein metabolic process; viral transcription; viral infectious cycle;
RPL37A	15	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; translation; translational initiation; translational elongation; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process; translational termination; SRP-dependent cotranslational protein targeting to membrane; cellular protein metabolic process; viral transcription; viral infectious cycle;
RPL38	15	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; translation; translational initiation; translational elongation; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process; translational termination; SRP-dependent cotranslational protein targeting to membrane; cellular protein metabolic process; viral transcription; viral infectious cycle;
XPO1	10	protein binding; nucleolus; cytoplasm; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process; ribonucleoprotein complex; viral infectious cycle;
NCBP1	8	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; protein binding; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process; ribonucleoprotein complex;
SMG1	7	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; protein binding; cytoplasm; cytosol; gene expression; mRNA metabolic process; RNA metabolic process;
SMG7	7	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; protein binding; cytoplasm; cytosol; gene expression; mRNA metabolic process; RNA metabolic process;
EIF2B1	7	translation; translational initiation; protein binding; cytoplasm; cytosol; gene expression; cellular protein metabolic process;
SRP19	7	translation; nucleolus; cytoplasm; cytosol; gene expression; SRP-dependent cotranslational protein targeting to membrane; cellular protein metabolic process;
DCPS	7	protein binding; nucleolus; cytoplasm; cytosol; gene expression; mRNA metabolic process; RNA metabolic process;
HSPA8	7	protein binding; nucleolus; cytosol; gene expression; mRNA metabolic process; RNA metabolic process; ribonucleoprotein complex;
PSMC3	7	protein binding; cytoplasm; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process;
EEF1D	6	translation; translational elongation; protein binding; cytosol; gene expression; cellular protein metabolic process;
EEF1G	6	translation; translational elongation; protein binding; cytosol; gene expression; cellular protein metabolic process;
ATXN2	6	protein binding; nucleolus; cytoplasm; RNA metabolic process; regulation of translation; ribonucleoprotein complex;
PSMB7	6	protein binding; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process;
PSMD5	6	protein binding; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process;
PSMD7	6	protein binding; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process;
RAN	6	protein binding; cytoplasm; cytosol; viral reproduction; gene expression; viral infectious cycle;
UBB	6	protein binding; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process;
UBC	6	protein binding; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process;
PSME1	6	cytoplasm; cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process;
IGF2BP3	5	translation; protein binding; cytoplasm; cytosol; translation regulator activity;
SEC61B	5	translation; protein binding; gene expression; SRP-dependent cotranslational protein targeting to membrane; cellular protein metabolic process;
CNOT6	5	protein binding; cytosol; gene expression; mRNA metabolic process; RNA metabolic process;
DDX6	5	protein binding; cytosol; gene expression; mRNA metabolic process; RNA metabolic process;
DHX9	5	protein binding; nucleolus; cytoplasm; gene expression; ribonucleoprotein complex;
GSK3B	5	protein binding; nucleolus; cytoplasm; cytosol; ribonucleoprotein complex;
HNRNPA2B1	5	protein binding; nucleolus; cytoplasm; gene expression; ribonucleoprotein complex;
IARS	5	protein binding; nucleolus; cytoplasm; cytosol; gene expression;
LSM4	5	protein binding; cytosol; gene expression; mRNA metabolic process; RNA metabolic process;
MAPK1	5	protein binding; nucleolus; cytoplasm; cytosol; positive regulation of cell proliferation;
MEN1	5	protein binding; nucleolus; cytoplasm; cytosol; gene expression;
PATL1	5	protein binding; cytosol; gene expression; mRNA metabolic process; RNA metabolic process;
PDCD4	5	protein binding; nucleolus; cytoplasm; cytosol; RNA metabolic process;
RQCD1	5	protein binding; cytosol; gene expression; mRNA metabolic process; RNA metabolic process;
SSRP1	5	protein binding; nucleolus; cytoplasm; viral reproduction; gene expression;
YAP1	5	protein binding; cytoplasm; cytosol; gene expression; positive regulation of cell proliferation;
TNKS1BP1	5	cytoplasm; cytosol; gene expression; mRNA metabolic process; RNA metabolic process;
PSMA8	5	cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process;
PSME2	5	cytosol; viral reproduction; gene expression; mRNA metabolic process; RNA metabolic process;

Genes shared at least 2 KEGG pathways with RPS9 (count: 0)

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Region: chr19:54704610..54752862 View in gBrowse