ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	RPL12
Symbol Alias	L12
Approved Name	ribosomal protein L12
Location	9q34
Position	chr9:130209953-130213684, -
External Links	HGNC: 10302 Entrez Gene: 6136 Ensembl: ENSG00000197958 UCSC: uc004bqy.1
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
9q33	chr9:117700000-130300000	2 (1/1/0)

Gene related GO terms (count: 17)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 17)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0006415	translational termination	Biological Process		13
GO:0006414	translational elongation	Biological Process		16
GO:0010467	gene expression	Biological Process		140
GO:0006614	SRP-dependent cotranslational protein targeting to membrane	Biological Process		18
GO:0016070	RNA metabolic process	Biological Process		46
GO:0016032	viral reproduction	Biological Process		57
GO:0019058	viral infectious cycle	Biological Process		15
GO:0016071	mRNA metabolic process	Biological Process		34
GO:0022625	cytosolic large ribosomal subunit	Cellular Component	IDA[12962325]	7
GO:0019083	viral transcription	Biological Process		13
GO:0044267	cellular protein metabolic process	Biological Process		64
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Biological Process		16
GO:0003723	RNA binding	Molecular Function		104
GO:0003735	structural constituent of ribosome	Molecular Function	NAS[12962325]	24
GO:0005829	cytosol	Cellular Component		447
GO:0006412	translation	Biological Process	NAS[12962325]	42
GO:0006413	translational initiation	Biological Process		14

Gene related KEGG pathways (count: 1)

ID	Name	No. of Genes in ADHDgene	Brief Description
hsa03010	Ribosome	14

Genes shared at least 5 GO terms with RPL12 (count: 33)

Gene Symbol	Pathway Count	Pathway List
RPL13	17	translational termination; translational elongation; gene expression; SRP-dependent cotranslational protein targeting to membrane; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process; cytosolic large ribosomal subunit; viral transcription; cellular protein metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA binding; structural constituent of ribosome; cytosol; translation; translational initiation;
RPL14	17	translational termination; translational elongation; gene expression; SRP-dependent cotranslational protein targeting to membrane; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process; cytosolic large ribosomal subunit; viral transcription; cellular protein metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA binding; structural constituent of ribosome; cytosol; translation; translational initiation;
RPL37	17	translational termination; translational elongation; gene expression; SRP-dependent cotranslational protein targeting to membrane; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process; cytosolic large ribosomal subunit; viral transcription; cellular protein metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA binding; structural constituent of ribosome; cytosol; translation; translational initiation;
RPL38	17	translational termination; translational elongation; gene expression; SRP-dependent cotranslational protein targeting to membrane; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process; cytosolic large ribosomal subunit; viral transcription; cellular protein metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA binding; structural constituent of ribosome; cytosol; translation; translational initiation;
FAU	16	translational termination; translational elongation; gene expression; SRP-dependent cotranslational protein targeting to membrane; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process; viral transcription; cellular protein metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA binding; structural constituent of ribosome; cytosol; translation; translational initiation;
RPL35	16	translational termination; translational elongation; gene expression; SRP-dependent cotranslational protein targeting to membrane; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process; cytosolic large ribosomal subunit; viral transcription; cellular protein metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; cytosol; translation; translational initiation;
RPL37A	16	translational termination; translational elongation; gene expression; SRP-dependent cotranslational protein targeting to membrane; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process; cytosolic large ribosomal subunit; viral transcription; cellular protein metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; cytosol; translation; translational initiation;
RPS15A	16	translational termination; translational elongation; gene expression; SRP-dependent cotranslational protein targeting to membrane; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process; viral transcription; cellular protein metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA binding; structural constituent of ribosome; cytosol; translation; translational initiation;
RPS25	16	translational termination; translational elongation; gene expression; SRP-dependent cotranslational protein targeting to membrane; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process; viral transcription; cellular protein metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA binding; structural constituent of ribosome; cytosol; translation; translational initiation;
RPS12	15	translational termination; translational elongation; gene expression; SRP-dependent cotranslational protein targeting to membrane; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process; viral transcription; cellular protein metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; cytosol; translation; translational initiation;
RPS3	15	translational termination; translational elongation; gene expression; SRP-dependent cotranslational protein targeting to membrane; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process; viral transcription; cellular protein metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; cytosol; translation; translational initiation;
RPS9	15	translational termination; translational elongation; gene expression; SRP-dependent cotranslational protein targeting to membrane; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process; viral transcription; cellular protein metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; cytosol; translation; translational initiation;
NCBP1	7	gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA binding; cytosol;
XPO1	7	gene expression; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process; RNA binding; cytosol;
EEF1D	5	translational elongation; gene expression; cellular protein metabolic process; cytosol; translation;
EEF1G	5	translational elongation; gene expression; cellular protein metabolic process; cytosol; translation;
CNOT6	5	gene expression; RNA metabolic process; mRNA metabolic process; RNA binding; cytosol;
DDX6	5	gene expression; RNA metabolic process; mRNA metabolic process; RNA binding; cytosol;
EIF2B1	5	gene expression; cellular protein metabolic process; cytosol; translation; translational initiation;
LSM4	5	gene expression; RNA metabolic process; mRNA metabolic process; RNA binding; cytosol;
PATL1	5	gene expression; RNA metabolic process; mRNA metabolic process; RNA binding; cytosol;
PSMA8	5	gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process; cytosol;
PSMB7	5	gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process; cytosol;
PSMC3	5	gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process; cytosol;
PSMD5	5	gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process; cytosol;
PSMD7	5	gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process; cytosol;
PSME1	5	gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process; cytosol;
PSME2	5	gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process; cytosol;
SMG1	5	gene expression; RNA metabolic process; mRNA metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; cytosol;
SMG7	5	gene expression; RNA metabolic process; mRNA metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; cytosol;
SRP19	5	gene expression; SRP-dependent cotranslational protein targeting to membrane; cellular protein metabolic process; cytosol; translation;
UBB	5	gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process; cytosol;
UBC	5	gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process; cytosol;

Genes shared at least 2 KEGG pathways with RPL12 (count: 0)

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Region: chr9:130209953..130213684 View in gBrowse