ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	RPS15A
Symbol Alias	S15A
Approved Name	ribosomal protein S15a
Location	16p12.3
Position	chr16:18792617-18801656, -
External Links	HGNC: 10389 Entrez Gene: 6210 Ensembl: ENSG00000134419 UCSC: uc002dfi.1
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
16p12.3-12.2	chr16:16800000-24200000	1 (1/0/0)

Gene related GO terms (count: 22)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 22)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0009615	response to virus	Biological Process	IDA[15108328]	21
GO:0010467	gene expression	Biological Process		140
GO:0006614	SRP-dependent cotranslational protein targeting to membrane	Biological Process		18
GO:0008284	positive regulation of cell proliferation	Biological Process	IDA[15108328]	69
GO:0006414	translational elongation	Biological Process		16
GO:0006415	translational termination	Biological Process		13
GO:0006412	translation	Biological Process	IC[15883184]; NAS[9582194]	42
GO:0006413	translational initiation	Biological Process		14
GO:0005739	mitochondrion	Cellular Component		183
GO:0005829	cytosol	Cellular Component		447
GO:0003735	structural constituent of ribosome	Molecular Function	IDA[15883184]; NAS[9582194]	24
GO:0005737	cytoplasm	Cellular Component	IDA[15108328]	690
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Biological Process		16
GO:0003723	RNA binding	Molecular Function	NAS[9582194]	104
GO:0022627	cytosolic small ribosomal subunit	Cellular Component	IDA[15883184]	6
GO:0019083	viral transcription	Biological Process		13
GO:0045787	positive regulation of cell cycle	Biological Process	IDA[15108328]	7
GO:0044267	cellular protein metabolic process	Biological Process		64
GO:0016070	RNA metabolic process	Biological Process		46
GO:0016032	viral reproduction	Biological Process		57
GO:0019058	viral infectious cycle	Biological Process		15
GO:0016071	mRNA metabolic process	Biological Process		34

Gene related KEGG pathways (count: 1)

ID	Name	No. of Genes in ADHDgene	Brief Description
hsa03010	Ribosome	14

Genes shared at least 5 GO terms with RPS15A (count: 37)

Gene Symbol	Pathway Count	Pathway List
RPS25	18	gene expression; SRP-dependent cotranslational protein targeting to membrane; translational elongation; translational termination; translation; translational initiation; cytosol; structural constituent of ribosome; cytoplasm; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA binding; cytosolic small ribosomal subunit; viral transcription; cellular protein metabolic process; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process;
RPS9	18	gene expression; SRP-dependent cotranslational protein targeting to membrane; positive regulation of cell proliferation; translational elongation; translational termination; translation; translational initiation; cytosol; structural constituent of ribosome; cytoplasm; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; cytosolic small ribosomal subunit; viral transcription; cellular protein metabolic process; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process;
FAU	17	gene expression; SRP-dependent cotranslational protein targeting to membrane; translational elongation; translational termination; translation; translational initiation; cytosol; structural constituent of ribosome; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA binding; cytosolic small ribosomal subunit; viral transcription; cellular protein metabolic process; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process;
RPL14	17	gene expression; SRP-dependent cotranslational protein targeting to membrane; translational elongation; translational termination; translation; translational initiation; cytosol; structural constituent of ribosome; cytoplasm; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA binding; viral transcription; cellular protein metabolic process; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process;
RPS3	17	gene expression; SRP-dependent cotranslational protein targeting to membrane; translational elongation; translational termination; translation; translational initiation; cytosol; structural constituent of ribosome; cytoplasm; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; cytosolic small ribosomal subunit; viral transcription; cellular protein metabolic process; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process;
RPL12	16	gene expression; SRP-dependent cotranslational protein targeting to membrane; translational elongation; translational termination; translation; translational initiation; cytosol; structural constituent of ribosome; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA binding; viral transcription; cellular protein metabolic process; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process;
RPL13	16	gene expression; SRP-dependent cotranslational protein targeting to membrane; translational elongation; translational termination; translation; translational initiation; cytosol; structural constituent of ribosome; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA binding; viral transcription; cellular protein metabolic process; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process;
RPL35	16	gene expression; SRP-dependent cotranslational protein targeting to membrane; translational elongation; translational termination; translation; translational initiation; cytosol; structural constituent of ribosome; cytoplasm; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral transcription; cellular protein metabolic process; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process;
RPL37	16	gene expression; SRP-dependent cotranslational protein targeting to membrane; translational elongation; translational termination; translation; translational initiation; cytosol; structural constituent of ribosome; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA binding; viral transcription; cellular protein metabolic process; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process;
RPL38	16	gene expression; SRP-dependent cotranslational protein targeting to membrane; translational elongation; translational termination; translation; translational initiation; cytosol; structural constituent of ribosome; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA binding; viral transcription; cellular protein metabolic process; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process;
RPS12	16	gene expression; SRP-dependent cotranslational protein targeting to membrane; translational elongation; translational termination; translation; translational initiation; cytosol; structural constituent of ribosome; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; cytosolic small ribosomal subunit; viral transcription; cellular protein metabolic process; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process;
RPL37A	15	gene expression; SRP-dependent cotranslational protein targeting to membrane; translational elongation; translational termination; translation; translational initiation; cytosol; structural constituent of ribosome; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral transcription; cellular protein metabolic process; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process;
XPO1	8	gene expression; cytosol; cytoplasm; RNA binding; RNA metabolic process; viral reproduction; viral infectious cycle; mRNA metabolic process;
NCBP1	7	gene expression; cytosol; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA binding; RNA metabolic process; viral reproduction; mRNA metabolic process;
SRP19	7	gene expression; SRP-dependent cotranslational protein targeting to membrane; translation; mitochondrion; cytosol; cytoplasm; cellular protein metabolic process;
EEF1G	6	response to virus; gene expression; translational elongation; translation; cytosol; cellular protein metabolic process;
DCPS	6	gene expression; mitochondrion; cytosol; cytoplasm; RNA metabolic process; mRNA metabolic process;
EIF2B1	6	gene expression; translation; translational initiation; cytosol; cytoplasm; cellular protein metabolic process;
PSMC3	6	gene expression; cytosol; cytoplasm; RNA metabolic process; viral reproduction; mRNA metabolic process;
PSME1	6	gene expression; cytosol; cytoplasm; RNA metabolic process; viral reproduction; mRNA metabolic process;
SARS	6	gene expression; translation; mitochondrion; cytosol; cytoplasm; RNA binding;
SMG1	6	gene expression; cytosol; cytoplasm; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA metabolic process; mRNA metabolic process;
SMG7	6	gene expression; cytosol; cytoplasm; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA metabolic process; mRNA metabolic process;
CNOT6	5	gene expression; cytosol; RNA binding; RNA metabolic process; mRNA metabolic process;
DDX6	5	gene expression; cytosol; RNA binding; RNA metabolic process; mRNA metabolic process;
EEF1D	5	gene expression; translational elongation; translation; cytosol; cellular protein metabolic process;
LSM4	5	gene expression; cytosol; RNA binding; RNA metabolic process; mRNA metabolic process;
PATL1	5	gene expression; cytosol; RNA binding; RNA metabolic process; mRNA metabolic process;
PSMA8	5	gene expression; cytosol; RNA metabolic process; viral reproduction; mRNA metabolic process;
PSMB7	5	gene expression; cytosol; RNA metabolic process; viral reproduction; mRNA metabolic process;
PSMD5	5	gene expression; cytosol; RNA metabolic process; viral reproduction; mRNA metabolic process;
PSMD7	5	gene expression; cytosol; RNA metabolic process; viral reproduction; mRNA metabolic process;
PSME2	5	gene expression; cytosol; RNA metabolic process; viral reproduction; mRNA metabolic process;
RAN	5	gene expression; cytosol; cytoplasm; viral reproduction; viral infectious cycle;
TNKS1BP1	5	gene expression; cytosol; cytoplasm; RNA metabolic process; mRNA metabolic process;
UBB	5	gene expression; cytosol; RNA metabolic process; viral reproduction; mRNA metabolic process;
UBC	5	gene expression; cytosol; RNA metabolic process; viral reproduction; mRNA metabolic process;

Genes shared at least 2 KEGG pathways with RPS15A (count: 0)

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Region: chr16:18792617..18801656 View in gBrowse