ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	RPS25
Symbol Alias	S25
Approved Name	ribosomal protein S25
Location	11q23.3
Position	chr11:118886422-118889401, -
External Links	HGNC: 10413 Entrez Gene: 6230 Ensembl: ENSG00000118181 UCSC: uc001pun.2
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
11q	chr11:53700000-135006516	2 (1/1/0)

Gene related GO terms (count: 22)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 22)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0022627	cytosolic small ribosomal subunit	Cellular Component	IDA[8706699]	6
GO:0044267	cellular protein metabolic process	Biological Process		64
GO:0016070	RNA metabolic process	Biological Process		46
GO:0016071	mRNA metabolic process	Biological Process		34
GO:0019058	viral infectious cycle	Biological Process		15
GO:0019083	viral transcription	Biological Process		13
GO:0006614	SRP-dependent cotranslational protein targeting to membrane	Biological Process		18
GO:0010467	gene expression	Biological Process		140
GO:0015935	small ribosomal subunit	Cellular Component	IDA[15883184]	2
GO:0016032	viral reproduction	Biological Process		57
GO:0006412	translation	Biological Process	IC[8706699]; NAS[8020948]	42
GO:0006413	translational initiation	Biological Process		14
GO:0006414	translational elongation	Biological Process		16
GO:0006415	translational termination	Biological Process		13
GO:0005737	cytoplasm	Cellular Component		690
GO:0005730	nucleolus	Cellular Component	IDA[10050887]	243
GO:0005840	ribosome	Cellular Component	IDA[1748303]; NAS[8020948]	12
GO:0005829	cytosol	Cellular Component		447
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Biological Process		16
GO:0000028	ribosomal small subunit assembly	Biological Process		1
GO:0003735	structural constituent of ribosome	Molecular Function		24
GO:0003723	RNA binding	Molecular Function	NAS[10050887]	104

Gene related KEGG pathways (count: 1)

ID	Name	No. of Genes in ADHDgene	Brief Description
hsa03010	Ribosome	14

Genes shared at least 5 GO terms with RPS25 (count: 39)

Gene Symbol	Pathway Count	Pathway List
RPS9	19	cytosolic small ribosomal subunit; cellular protein metabolic process; RNA metabolic process; mRNA metabolic process; viral infectious cycle; viral transcription; SRP-dependent cotranslational protein targeting to membrane; gene expression; viral reproduction; translation; translational initiation; translational elongation; translational termination; cytoplasm; nucleolus; ribosome; cytosol; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome;
FAU	18	cytosolic small ribosomal subunit; cellular protein metabolic process; RNA metabolic process; mRNA metabolic process; viral infectious cycle; viral transcription; SRP-dependent cotranslational protein targeting to membrane; gene expression; small ribosomal subunit; viral reproduction; translation; translational initiation; translational elongation; translational termination; cytosol; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; RNA binding;
RPS15A	18	cytosolic small ribosomal subunit; cellular protein metabolic process; RNA metabolic process; mRNA metabolic process; viral infectious cycle; viral transcription; SRP-dependent cotranslational protein targeting to membrane; gene expression; viral reproduction; translation; translational initiation; translational elongation; translational termination; cytoplasm; cytosol; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; RNA binding;
RPS3	17	cytosolic small ribosomal subunit; cellular protein metabolic process; RNA metabolic process; mRNA metabolic process; viral infectious cycle; viral transcription; SRP-dependent cotranslational protein targeting to membrane; gene expression; viral reproduction; translation; translational initiation; translational elongation; translational termination; cytoplasm; cytosol; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome;
RPL14	17	cellular protein metabolic process; RNA metabolic process; mRNA metabolic process; viral infectious cycle; viral transcription; SRP-dependent cotranslational protein targeting to membrane; gene expression; viral reproduction; translation; translational initiation; translational elongation; translational termination; cytoplasm; cytosol; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; RNA binding;
RPL35	17	cellular protein metabolic process; RNA metabolic process; mRNA metabolic process; viral infectious cycle; viral transcription; SRP-dependent cotranslational protein targeting to membrane; gene expression; viral reproduction; translation; translational initiation; translational elongation; translational termination; cytoplasm; nucleolus; cytosol; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome;
RPS12	16	cytosolic small ribosomal subunit; cellular protein metabolic process; RNA metabolic process; mRNA metabolic process; viral infectious cycle; viral transcription; SRP-dependent cotranslational protein targeting to membrane; gene expression; viral reproduction; translation; translational initiation; translational elongation; translational termination; cytosol; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome;
RPL12	16	cellular protein metabolic process; RNA metabolic process; mRNA metabolic process; viral infectious cycle; viral transcription; SRP-dependent cotranslational protein targeting to membrane; gene expression; viral reproduction; translation; translational initiation; translational elongation; translational termination; cytosol; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; RNA binding;
RPL13	16	cellular protein metabolic process; RNA metabolic process; mRNA metabolic process; viral infectious cycle; viral transcription; SRP-dependent cotranslational protein targeting to membrane; gene expression; viral reproduction; translation; translational initiation; translational elongation; translational termination; cytosol; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; RNA binding;
RPL37	16	cellular protein metabolic process; RNA metabolic process; mRNA metabolic process; viral infectious cycle; viral transcription; SRP-dependent cotranslational protein targeting to membrane; gene expression; viral reproduction; translation; translational initiation; translational elongation; translational termination; cytosol; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; RNA binding;
RPL38	16	cellular protein metabolic process; RNA metabolic process; mRNA metabolic process; viral infectious cycle; viral transcription; SRP-dependent cotranslational protein targeting to membrane; gene expression; viral reproduction; translation; translational initiation; translational elongation; translational termination; cytosol; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome; RNA binding;
RPL37A	15	cellular protein metabolic process; RNA metabolic process; mRNA metabolic process; viral infectious cycle; viral transcription; SRP-dependent cotranslational protein targeting to membrane; gene expression; viral reproduction; translation; translational initiation; translational elongation; translational termination; cytosol; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; structural constituent of ribosome;
XPO1	9	RNA metabolic process; mRNA metabolic process; viral infectious cycle; gene expression; viral reproduction; cytoplasm; nucleolus; cytosol; RNA binding;
SRP19	7	cellular protein metabolic process; SRP-dependent cotranslational protein targeting to membrane; gene expression; translation; cytoplasm; nucleolus; cytosol;
NCBP1	7	RNA metabolic process; mRNA metabolic process; gene expression; viral reproduction; cytosol; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; RNA binding;
EIF2B1	6	cellular protein metabolic process; gene expression; translation; translational initiation; cytoplasm; cytosol;
DCPS	6	RNA metabolic process; mRNA metabolic process; gene expression; cytoplasm; nucleolus; cytosol;
PSMC3	6	RNA metabolic process; mRNA metabolic process; gene expression; viral reproduction; cytoplasm; cytosol;
PSME1	6	RNA metabolic process; mRNA metabolic process; gene expression; viral reproduction; cytoplasm; cytosol;
SMG1	6	RNA metabolic process; mRNA metabolic process; gene expression; cytoplasm; cytosol; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay;
SMG7	6	RNA metabolic process; mRNA metabolic process; gene expression; cytoplasm; cytosol; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay;
EEF1D	5	cellular protein metabolic process; gene expression; translation; translational elongation; cytosol;
EEF1G	5	cellular protein metabolic process; gene expression; translation; translational elongation; cytosol;
CNOT6	5	RNA metabolic process; mRNA metabolic process; gene expression; cytosol; RNA binding;
DDX6	5	RNA metabolic process; mRNA metabolic process; gene expression; cytosol; RNA binding;
HSPA8	5	RNA metabolic process; mRNA metabolic process; gene expression; nucleolus; cytosol;
LSM4	5	RNA metabolic process; mRNA metabolic process; gene expression; cytosol; RNA binding;
PATL1	5	RNA metabolic process; mRNA metabolic process; gene expression; cytosol; RNA binding;
PDCD4	5	RNA metabolic process; cytoplasm; nucleolus; cytosol; RNA binding;
PSMA8	5	RNA metabolic process; mRNA metabolic process; gene expression; viral reproduction; cytosol;
PSMB7	5	RNA metabolic process; mRNA metabolic process; gene expression; viral reproduction; cytosol;
PSMD5	5	RNA metabolic process; mRNA metabolic process; gene expression; viral reproduction; cytosol;
PSMD7	5	RNA metabolic process; mRNA metabolic process; gene expression; viral reproduction; cytosol;
PSME2	5	RNA metabolic process; mRNA metabolic process; gene expression; viral reproduction; cytosol;
TNKS1BP1	5	RNA metabolic process; mRNA metabolic process; gene expression; cytoplasm; cytosol;
UBB	5	RNA metabolic process; mRNA metabolic process; gene expression; viral reproduction; cytosol;
UBC	5	RNA metabolic process; mRNA metabolic process; gene expression; viral reproduction; cytosol;
RAN	5	viral infectious cycle; gene expression; viral reproduction; cytoplasm; cytosol;
SARS	5	gene expression; translation; cytoplasm; cytosol; RNA binding;

Genes shared at least 2 KEGG pathways with RPS25 (count: 0)

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Region: chr11:118886422..118889401 View in gBrowse