ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	RPS25
Symbol Alias	S25
Approved Name	ribosomal protein S25
Location	11q23.3
Position	chr11:118886422-118889401, -1
External Links	HGNC: 10413 Entrez Gene: 6230 Ensembl: ENSG00000118181 UCSC: uc001pun.2
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
11q	chr11:53700000-135006516	2 (1/1/0)

Gene related GO terms (count: 22)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 22)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0005737	cytoplasm	cellular component	IDA	781
GO:0019058	viral infectious cycle	biological process	TAS	19
GO:0005829	cytosol	cellular component	TAS	485
GO:0003723	RNA binding	molecular function	NAS[10050887]	115
GO:0000028	ribosomal small subunit assembly	biological process	IEA	1
GO:0006414	translational elongation	biological process	TAS	21
GO:0010467	gene expression	biological process	TAS	154
GO:0044267	cellular protein metabolic process	biological process	TAS	78
GO:0005730	nucleolus	cellular component	IDA[10050887]	271
GO:0016070	RNA metabolic process	biological process	TAS	54
GO:0006614	SRP-dependent cotranslational protein targeting to membrane	biological process	TAS	23
GO:0015935	small ribosomal subunit	cellular component	IDA[15883184]	2
GO:0022627	cytosolic small ribosomal subunit	cellular component	IDA[8706699]	9
GO:0003735	structural constituent of ribosome	molecular function	IEA	29
GO:0006412	translation	biological process	IC[8706699]; NAS[8020948]; TAS	49
GO:0006413	translational initiation	biological process	TAS	19
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	biological process	TAS	23
GO:0016032	viral reproduction	biological process	TAS	66
GO:0006415	translational termination	biological process	TAS	17
GO:0005840	ribosome	cellular component	IDA[1748303]; NAS[8020948]	15
GO:0019083	viral transcription	biological process	TAS	17
GO:0016071	mRNA metabolic process	biological process	TAS	41

Gene related KEGG pathways (count: 1)

ID	Name	No. of Genes in ADHDgene	Brief Description
hsa03010	Ribosome	17

Genes shared at least 5 GO terms with RPS25 (count: 46)

Gene Symbol	Pathway Count	Pathway List
RPS9	19	cytoplasm; viral infectious cycle; cytosol; translational elongation; gene expression; cellular protein metabolic process; nucleolus; RNA metabolic process; SRP-dependent cotranslational protein targeting to membrane; cytosolic small ribosomal subunit; structural constituent of ribosome; translation; translational initiation; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral reproduction; translational termination; ribosome; viral transcription; mRNA metabolic process;
RPS15A	18	cytoplasm; viral infectious cycle; cytosol; RNA binding; translational elongation; gene expression; cellular protein metabolic process; RNA metabolic process; SRP-dependent cotranslational protein targeting to membrane; cytosolic small ribosomal subunit; structural constituent of ribosome; translation; translational initiation; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral reproduction; translational termination; viral transcription; mRNA metabolic process;
FAU	18	viral infectious cycle; cytosol; RNA binding; translational elongation; gene expression; cellular protein metabolic process; RNA metabolic process; SRP-dependent cotranslational protein targeting to membrane; small ribosomal subunit; cytosolic small ribosomal subunit; structural constituent of ribosome; translation; translational initiation; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral reproduction; translational termination; viral transcription; mRNA metabolic process;
RPS2	18	viral infectious cycle; cytosol; RNA binding; translational elongation; gene expression; cellular protein metabolic process; nucleolus; RNA metabolic process; SRP-dependent cotranslational protein targeting to membrane; cytosolic small ribosomal subunit; structural constituent of ribosome; translation; translational initiation; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral reproduction; translational termination; viral transcription; mRNA metabolic process;
RPS3	17	cytoplasm; viral infectious cycle; cytosol; translational elongation; gene expression; cellular protein metabolic process; RNA metabolic process; SRP-dependent cotranslational protein targeting to membrane; cytosolic small ribosomal subunit; structural constituent of ribosome; translation; translational initiation; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral reproduction; translational termination; viral transcription; mRNA metabolic process;
RPL35	17	cytoplasm; viral infectious cycle; cytosol; translational elongation; gene expression; cellular protein metabolic process; nucleolus; RNA metabolic process; SRP-dependent cotranslational protein targeting to membrane; structural constituent of ribosome; translation; translational initiation; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral reproduction; translational termination; viral transcription; mRNA metabolic process;
RPL14	17	cytoplasm; viral infectious cycle; cytosol; RNA binding; translational elongation; gene expression; cellular protein metabolic process; RNA metabolic process; SRP-dependent cotranslational protein targeting to membrane; structural constituent of ribosome; translation; translational initiation; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral reproduction; translational termination; viral transcription; mRNA metabolic process;
RPL3L	17	viral infectious cycle; cytosol; RNA binding; translational elongation; gene expression; cellular protein metabolic process; RNA metabolic process; SRP-dependent cotranslational protein targeting to membrane; structural constituent of ribosome; translation; translational initiation; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral reproduction; translational termination; ribosome; viral transcription; mRNA metabolic process;
RPS10	17	viral infectious cycle; cytosol; translational elongation; gene expression; cellular protein metabolic process; nucleolus; RNA metabolic process; SRP-dependent cotranslational protein targeting to membrane; cytosolic small ribosomal subunit; translation; translational initiation; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral reproduction; translational termination; ribosome; viral transcription; mRNA metabolic process;
RPL13	16	viral infectious cycle; cytosol; RNA binding; translational elongation; gene expression; cellular protein metabolic process; RNA metabolic process; SRP-dependent cotranslational protein targeting to membrane; structural constituent of ribosome; translation; translational initiation; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral reproduction; translational termination; viral transcription; mRNA metabolic process;
RPL27A	16	viral infectious cycle; cytosol; RNA binding; translational elongation; gene expression; cellular protein metabolic process; RNA metabolic process; SRP-dependent cotranslational protein targeting to membrane; structural constituent of ribosome; translation; translational initiation; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral reproduction; translational termination; viral transcription; mRNA metabolic process;
RPS12	16	viral infectious cycle; cytosol; translational elongation; gene expression; cellular protein metabolic process; RNA metabolic process; SRP-dependent cotranslational protein targeting to membrane; cytosolic small ribosomal subunit; structural constituent of ribosome; translation; translational initiation; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral reproduction; translational termination; viral transcription; mRNA metabolic process;
RPL37	16	viral infectious cycle; cytosol; RNA binding; translational elongation; gene expression; cellular protein metabolic process; RNA metabolic process; SRP-dependent cotranslational protein targeting to membrane; structural constituent of ribosome; translation; translational initiation; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral reproduction; translational termination; viral transcription; mRNA metabolic process;
RPL38	16	viral infectious cycle; cytosol; RNA binding; translational elongation; gene expression; cellular protein metabolic process; RNA metabolic process; SRP-dependent cotranslational protein targeting to membrane; structural constituent of ribosome; translation; translational initiation; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral reproduction; translational termination; viral transcription; mRNA metabolic process;
RPL12	16	viral infectious cycle; cytosol; RNA binding; translational elongation; gene expression; cellular protein metabolic process; RNA metabolic process; SRP-dependent cotranslational protein targeting to membrane; structural constituent of ribosome; translation; translational initiation; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral reproduction; translational termination; viral transcription; mRNA metabolic process;
RPL37A	15	viral infectious cycle; cytosol; translational elongation; gene expression; cellular protein metabolic process; RNA metabolic process; SRP-dependent cotranslational protein targeting to membrane; structural constituent of ribosome; translation; translational initiation; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral reproduction; translational termination; viral transcription; mRNA metabolic process;
XPO1	9	cytoplasm; viral infectious cycle; cytosol; RNA binding; gene expression; nucleolus; RNA metabolic process; viral reproduction; mRNA metabolic process;
PARN	7	cytoplasm; cytosol; gene expression; nucleolus; RNA metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; mRNA metabolic process;
RNPS1	7	cytoplasm; cytosol; RNA binding; gene expression; RNA metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; mRNA metabolic process;
SRP19	7	cytoplasm; cytosol; gene expression; cellular protein metabolic process; nucleolus; SRP-dependent cotranslational protein targeting to membrane; translation;
PAIP1	7	cytoplasm; cytosol; RNA binding; gene expression; RNA metabolic process; translational initiation; mRNA metabolic process;
NCBP1	7	cytosol; RNA binding; gene expression; RNA metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; viral reproduction; mRNA metabolic process;
SMG7	6	cytoplasm; cytosol; gene expression; RNA metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; mRNA metabolic process;
DCPS	6	cytoplasm; cytosol; gene expression; nucleolus; RNA metabolic process; mRNA metabolic process;
PSME1	6	cytoplasm; cytosol; gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process;
EIF2B1	6	cytoplasm; cytosol; gene expression; cellular protein metabolic process; translation; translational initiation;
SMG1	6	cytoplasm; cytosol; gene expression; RNA metabolic process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; mRNA metabolic process;
PSMC3	6	cytoplasm; cytosol; gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process;
TNKS1BP1	5	cytoplasm; cytosol; gene expression; RNA metabolic process; mRNA metabolic process;
SARS	5	cytoplasm; cytosol; RNA binding; gene expression; translation;
PDCD4	5	cytoplasm; cytosol; RNA binding; nucleolus; RNA metabolic process;
RAN	5	cytoplasm; viral infectious cycle; cytosol; gene expression; viral reproduction;
EEF1D	5	cytosol; translational elongation; gene expression; cellular protein metabolic process; translation;
UBC	5	cytosol; gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process;
HSPA8	5	cytosol; gene expression; nucleolus; RNA metabolic process; mRNA metabolic process;
PSMD5	5	cytosol; gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process;
DDX6	5	cytosol; RNA binding; gene expression; RNA metabolic process; mRNA metabolic process;
CNOT6	5	cytosol; RNA binding; gene expression; RNA metabolic process; mRNA metabolic process;
PSME2	5	cytosol; gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process;
PSMD7	5	cytosol; gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process;
LSM4	5	cytosol; RNA binding; gene expression; RNA metabolic process; mRNA metabolic process;
UBB	5	cytosol; gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process;
PATL1	5	cytosol; RNA binding; gene expression; RNA metabolic process; mRNA metabolic process;
PSMA8	5	cytosol; gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process;
PSMB7	5	cytosol; gene expression; RNA metabolic process; viral reproduction; mRNA metabolic process;
EEF1G	5	cytosol; translational elongation; gene expression; cellular protein metabolic process; translation;

Genes shared at least 2 KEGG pathways with RPS25 (count: 0)

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Region: chr11:118886422..118889401 View in gBrowse