ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	RQCD1
Symbol Alias	RCD1, RCD1+, CNOT9, CT129
Approved Name	RCD1 required for cell differentiation1 homolog (S. pombe)
Previous Name	"rcd1 (required for cell differentiation, S.pombe) homolog 1"
Name Alias	"cancer/testis antigen 129"
Location	2q35
Position	chr2:219433303-219461803, 1
External Links	HGNC: 10445 Entrez Gene: 9125 Ensembl: ENSG00000144580 UCSC: uc010zki.3
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
2q35	chr2:215300000-221500000	1 (1/0/0)

Gene related GO terms (count: 14)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 14)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0005634	nucleus	cellular component	IEA	877
GO:0016071	mRNA metabolic process	biological process	TAS	41
GO:0006355	regulation of transcription, DNA-dependent	biological process	IEA	182
GO:0000289	nuclear-transcribed mRNA poly(A) tail shortening	biological process	TAS	5
GO:2000327	positive regulation of ligand-dependent nuclear receptor transcription coactivator activity	biological process	IDA[18180299]	2
GO:0000288	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	biological process	TAS	9
GO:0019221	cytokine-mediated signaling pathway	biological process	IEA	33
GO:0007548	sex differentiation	biological process	TAS[9447985]	5
GO:0010467	gene expression	biological process	TAS	154
GO:0006351	transcription, DNA-dependent	biological process	IEA	281
GO:0000932	cytoplasmic mRNA processing body	cellular component	ISS	8
GO:0005829	cytosol	cellular component	TAS	485
GO:0005515	protein binding	molecular function	IPI[18180299]	1015
GO:0016070	RNA metabolic process	biological process	TAS	54

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with RQCD1 (count: 42)

Gene Symbol	Pathway Count	Pathway List
CNOT6	11	nucleus; mRNA metabolic process; regulation of transcription, DNA-dependent; nuclear-transcribed mRNA poly(A) tail shortening; positive regulation of ligand-dependent nuclear receptor transcription coactivator activity; nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; gene expression; transcription, DNA-dependent; cytosol; protein binding; RNA metabolic process;
PARN	8	nucleus; mRNA metabolic process; nuclear-transcribed mRNA poly(A) tail shortening; nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; gene expression; cytosol; protein binding; RNA metabolic process;
RNPS1	7	nucleus; mRNA metabolic process; gene expression; transcription, DNA-dependent; cytosol; protein binding; RNA metabolic process;
TNKS1BP1	7	nucleus; mRNA metabolic process; nuclear-transcribed mRNA poly(A) tail shortening; nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; gene expression; cytosol; RNA metabolic process;
PSMC3	7	nucleus; mRNA metabolic process; gene expression; cytoplasmic mRNA processing body; cytosol; protein binding; RNA metabolic process;
HSPA8	7	nucleus; mRNA metabolic process; gene expression; transcription, DNA-dependent; cytosol; protein binding; RNA metabolic process;
DCPS	7	nucleus; mRNA metabolic process; nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; gene expression; cytosol; protein binding; RNA metabolic process;
UBC	7	mRNA metabolic process; cytokine-mediated signaling pathway; gene expression; transcription, DNA-dependent; cytosol; protein binding; RNA metabolic process;
PATL1	7	mRNA metabolic process; nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; gene expression; cytoplasmic mRNA processing body; cytosol; protein binding; RNA metabolic process;
UBB	7	mRNA metabolic process; cytokine-mediated signaling pathway; gene expression; transcription, DNA-dependent; cytosol; protein binding; RNA metabolic process;
DDX6	7	mRNA metabolic process; nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; gene expression; cytoplasmic mRNA processing body; cytosol; protein binding; RNA metabolic process;
PAIP1	7	mRNA metabolic process; nuclear-transcribed mRNA poly(A) tail shortening; nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; gene expression; cytosol; protein binding; RNA metabolic process;
RPS3	6	nucleus; mRNA metabolic process; gene expression; cytosol; protein binding; RNA metabolic process;
SMG1	6	nucleus; mRNA metabolic process; gene expression; cytosol; protein binding; RNA metabolic process;
EEF1D	6	nucleus; regulation of transcription, DNA-dependent; gene expression; transcription, DNA-dependent; cytosol; protein binding;
SMG7	6	nucleus; mRNA metabolic process; gene expression; cytosol; protein binding; RNA metabolic process;
NCBP1	6	nucleus; mRNA metabolic process; gene expression; cytosol; protein binding; RNA metabolic process;
LSM4	6	mRNA metabolic process; nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; gene expression; cytosol; protein binding; RNA metabolic process;
HABP4	5	nucleus; regulation of transcription, DNA-dependent; transcription, DNA-dependent; cytosol; protein binding;
SNRPD1	5	nucleus; gene expression; cytosol; protein binding; RNA metabolic process;
CLNS1A	5	nucleus; gene expression; cytosol; protein binding; RNA metabolic process;
BIRC2	5	nucleus; regulation of transcription, DNA-dependent; transcription, DNA-dependent; cytosol; protein binding;
HMGA1	5	nucleus; regulation of transcription, DNA-dependent; transcription, DNA-dependent; cytosol; protein binding;
PRKAA1	5	nucleus; regulation of transcription, DNA-dependent; transcription, DNA-dependent; cytosol; protein binding;
GEMIN2	5	nucleus; gene expression; cytosol; protein binding; RNA metabolic process;
NEDD4L	5	nucleus; gene expression; transcription, DNA-dependent; cytosol; protein binding;
MEN1	5	nucleus; gene expression; transcription, DNA-dependent; cytosol; protein binding;
PSMA8	5	nucleus; mRNA metabolic process; gene expression; cytosol; RNA metabolic process;
CTNND1	5	nucleus; regulation of transcription, DNA-dependent; transcription, DNA-dependent; cytosol; protein binding;
DAXX	5	nucleus; regulation of transcription, DNA-dependent; transcription, DNA-dependent; cytosol; protein binding;
MAPK3	5	nucleus; cytokine-mediated signaling pathway; gene expression; cytosol; protein binding;
WASL	5	nucleus; regulation of transcription, DNA-dependent; transcription, DNA-dependent; cytosol; protein binding;
XPO1	5	mRNA metabolic process; gene expression; cytosol; protein binding; RNA metabolic process;
RPL13	5	mRNA metabolic process; gene expression; cytosol; protein binding; RNA metabolic process;
PSMB7	5	mRNA metabolic process; gene expression; cytosol; protein binding; RNA metabolic process;
RPS9	5	mRNA metabolic process; gene expression; cytosol; protein binding; RNA metabolic process;
RPL27A	5	mRNA metabolic process; gene expression; cytosol; protein binding; RNA metabolic process;
RPL14	5	mRNA metabolic process; gene expression; cytosol; protein binding; RNA metabolic process;
RPS2	5	mRNA metabolic process; gene expression; cytosol; protein binding; RNA metabolic process;
RPS10	5	mRNA metabolic process; gene expression; cytosol; protein binding; RNA metabolic process;
PSMD5	5	mRNA metabolic process; gene expression; cytosol; protein binding; RNA metabolic process;
PSMD7	5	mRNA metabolic process; gene expression; cytosol; protein binding; RNA metabolic process;

Genes shared at least 2 KEGG pathways with RQCD1 (count: 0)

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Region: chr2:219433303..219461803 View in gBrowse