ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	HOXA9
Previous Symbol	HOX1G, HOX1
Approved Name	homeobox A9
Previous Name	homeo box A9
Location	7p15.2
Position	chr7:27202057-27219632, -
External Links	HGNC: 5109 Entrez Gene: 3205 Ensembl: ENSG00000078399 UCSC: uc003syt.2
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
7p15	chr7:20900000-28800000	2 (1/1/0)

Gene related GO terms (count: 17)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 17)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function		132
GO:0005515	protein binding	Molecular Function	IPI[19060904]	910
GO:0005634	nucleus	Cellular Component		770
GO:0005667	transcription factor complex	Cellular Component		51
GO:0048706	embryonic skeletal system development	Biological Process		4
GO:0045638	negative regulation of myeloid cell differentiation	Biological Process		3
GO:0043565	sequence-specific DNA binding	Molecular Function		72
GO:0042118	endothelial cell activation	Biological Process		1
GO:0060216	definitive hemopoiesis	Biological Process		2
GO:0009952	anterior/posterior pattern specification	Biological Process		26
GO:0007275	multicellular organismal development	Biological Process	TAS[8563754]	71
GO:0006351	transcription, DNA-dependent	Biological Process		247
GO:0005737	cytoplasm	Cellular Component		690
GO:0035115	embryonic forelimb morphogenesis	Biological Process		4
GO:0030879	mammary gland development	Biological Process		2
GO:0019899	enzyme binding	Molecular Function		47
GO:0009954	proximal/distal pattern formation	Biological Process		5

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with HOXA9 (count: 52)

Gene Symbol	Pathway Count	Pathway List
HOXA10	8	sequence-specific DNA binding transcription factor activity; protein binding; transcription factor complex; sequence-specific DNA binding; anterior/posterior pattern specification; multicellular organismal development; transcription, DNA-dependent; proximal/distal pattern formation;
HOXA11	8	sequence-specific DNA binding transcription factor activity; transcription factor complex; sequence-specific DNA binding; anterior/posterior pattern specification; multicellular organismal development; transcription, DNA-dependent; cytoplasm; proximal/distal pattern formation;
HOXA1	7	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; sequence-specific DNA binding; anterior/posterior pattern specification; multicellular organismal development; transcription, DNA-dependent;
HOXB1	7	sequence-specific DNA binding transcription factor activity; nucleus; sequence-specific DNA binding; anterior/posterior pattern specification; multicellular organismal development; transcription, DNA-dependent; cytoplasm;
NCOR1	7	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; transcription factor complex; sequence-specific DNA binding; transcription, DNA-dependent; cytoplasm;
POU2F3	7	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; transcription factor complex; sequence-specific DNA binding; transcription, DNA-dependent; cytoplasm;
BSX	6	sequence-specific DNA binding transcription factor activity; nucleus; transcription factor complex; sequence-specific DNA binding; transcription, DNA-dependent; cytoplasm;
ETS1	6	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; transcription factor complex; sequence-specific DNA binding; transcription, DNA-dependent;
HMGA1	6	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; transcription factor complex; transcription, DNA-dependent; enzyme binding;
HNF1B	6	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; transcription factor complex; sequence-specific DNA binding; anterior/posterior pattern specification;
HOXA5	6	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; sequence-specific DNA binding; anterior/posterior pattern specification; transcription, DNA-dependent;
KDM1A	6	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; transcription factor complex; transcription, DNA-dependent; enzyme binding;
LMX1B	6	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; sequence-specific DNA binding; multicellular organismal development; transcription, DNA-dependent;
RELA	6	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; transcription factor complex; sequence-specific DNA binding; cytoplasm;
ATF6	5	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; sequence-specific DNA binding; transcription, DNA-dependent;
BATF2	5	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; sequence-specific DNA binding; transcription, DNA-dependent;
CREBZF	5	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; sequence-specific DNA binding; transcription, DNA-dependent;
E2F5	5	sequence-specific DNA binding transcription factor activity; protein binding; transcription factor complex; transcription, DNA-dependent; cytoplasm;
FOXD4	5	sequence-specific DNA binding transcription factor activity; nucleus; transcription factor complex; sequence-specific DNA binding; multicellular organismal development;
FOXL1	5	sequence-specific DNA binding transcription factor activity; nucleus; transcription factor complex; sequence-specific DNA binding; multicellular organismal development;
HES1	5	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; sequence-specific DNA binding; cytoplasm;
HEY2	5	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; sequence-specific DNA binding; cytoplasm;
HINFP	5	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; transcription, DNA-dependent; enzyme binding;
HOXA13	5	sequence-specific DNA binding transcription factor activity; nucleus; sequence-specific DNA binding; transcription, DNA-dependent; embryonic forelimb morphogenesis;
HOXA2	5	sequence-specific DNA binding transcription factor activity; nucleus; sequence-specific DNA binding; anterior/posterior pattern specification; transcription, DNA-dependent;
HOXA3	5	sequence-specific DNA binding transcription factor activity; nucleus; sequence-specific DNA binding; anterior/posterior pattern specification; transcription, DNA-dependent;
HOXA4	5	sequence-specific DNA binding transcription factor activity; nucleus; sequence-specific DNA binding; anterior/posterior pattern specification; transcription, DNA-dependent;
HOXA6	5	sequence-specific DNA binding transcription factor activity; nucleus; sequence-specific DNA binding; anterior/posterior pattern specification; transcription, DNA-dependent;
HOXA7	5	sequence-specific DNA binding transcription factor activity; nucleus; sequence-specific DNA binding; anterior/posterior pattern specification; transcription, DNA-dependent;
HOXB3	5	sequence-specific DNA binding transcription factor activity; nucleus; definitive hemopoiesis; anterior/posterior pattern specification; transcription, DNA-dependent;
IKZF1	5	sequence-specific DNA binding transcription factor activity; nucleus; sequence-specific DNA binding; transcription, DNA-dependent; cytoplasm;
IRX3	5	sequence-specific DNA binding transcription factor activity; nucleus; sequence-specific DNA binding; transcription, DNA-dependent; cytoplasm;
MEIS2	5	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; negative regulation of myeloid cell differentiation; sequence-specific DNA binding;
MTA2	5	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; transcription factor complex; sequence-specific DNA binding;
PRDM1	5	sequence-specific DNA binding transcription factor activity; nucleus; sequence-specific DNA binding; transcription, DNA-dependent; cytoplasm;
SREBF1	5	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; sequence-specific DNA binding; transcription, DNA-dependent;
TAF10	5	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; cytoplasm; enzyme binding;
TBX1	5	sequence-specific DNA binding transcription factor activity; nucleus; sequence-specific DNA binding; anterior/posterior pattern specification; transcription, DNA-dependent;
TCF25	5	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; transcription, DNA-dependent; cytoplasm;
TFEB	5	sequence-specific DNA binding transcription factor activity; nucleus; transcription factor complex; transcription, DNA-dependent; cytoplasm;
TSHZ2	5	sequence-specific DNA binding transcription factor activity; nucleus; sequence-specific DNA binding; multicellular organismal development; transcription, DNA-dependent;
ZNF24	5	sequence-specific DNA binding transcription factor activity; protein binding; nucleus; sequence-specific DNA binding; transcription, DNA-dependent;
APC	5	protein binding; nucleus; anterior/posterior pattern specification; cytoplasm; proximal/distal pattern formation;
CTNND2	5	protein binding; nucleus; multicellular organismal development; transcription, DNA-dependent; cytoplasm;
DAXX	5	protein binding; nucleus; transcription, DNA-dependent; cytoplasm; enzyme binding;
DEAF1	5	protein binding; nucleus; transcription factor complex; embryonic skeletal system development; cytoplasm;
FLII	5	protein binding; nucleus; multicellular organismal development; transcription, DNA-dependent; cytoplasm;
MEN1	5	protein binding; nucleus; sequence-specific DNA binding; transcription, DNA-dependent; cytoplasm;
NR4A2	5	protein binding; nucleus; sequence-specific DNA binding; transcription, DNA-dependent; cytoplasm;
PGR	5	protein binding; nucleus; sequence-specific DNA binding; cytoplasm; enzyme binding;
TFAP2A	5	protein binding; nucleus; sequence-specific DNA binding; cytoplasm; embryonic forelimb morphogenesis;
ZBTB16	5	protein binding; nucleus; negative regulation of myeloid cell differentiation; anterior/posterior pattern specification; transcription, DNA-dependent;

Genes shared at least 2 KEGG pathways with HOXA9 (count: 0)

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Region: chr7:27202057..27219632 View in gBrowse