ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	HOXA4
Previous Symbol	HOX1D, HOX1
Approved Name	homeobox A4
Previous Name	homeo box A4
Location	7p15.2
Position	chr7:27168126-27192217, -
External Links	HGNC: 5105 Entrez Gene: 3201 Ensembl: ENSG00000197576 UCSC: uc003sym.3
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
7p15	chr7:20900000-28800000	2 (1/1/0)

Gene related GO terms (count: 7)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 7)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0048704	embryonic skeletal system morphogenesis	Biological Process		9
GO:0043565	sequence-specific DNA binding	Molecular Function		72
GO:0009952	anterior/posterior pattern specification	Biological Process		26
GO:0009653	anatomical structure morphogenesis	Biological Process	TAS[1675427]	26
GO:0006351	transcription, DNA-dependent	Biological Process		247
GO:0005634	nucleus	Cellular Component		770
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function		132

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with HOXA4 (count: 12)

Gene Symbol	Pathway Count	Pathway List
HOXA3	6	embryonic skeletal system morphogenesis; sequence-specific DNA binding; anterior/posterior pattern specification; transcription, DNA-dependent; nucleus; sequence-specific DNA binding transcription factor activity;
HOXA5	6	embryonic skeletal system morphogenesis; sequence-specific DNA binding; anterior/posterior pattern specification; transcription, DNA-dependent; nucleus; sequence-specific DNA binding transcription factor activity;
HOXA6	6	embryonic skeletal system morphogenesis; sequence-specific DNA binding; anterior/posterior pattern specification; transcription, DNA-dependent; nucleus; sequence-specific DNA binding transcription factor activity;
HOXA7	6	embryonic skeletal system morphogenesis; sequence-specific DNA binding; anterior/posterior pattern specification; transcription, DNA-dependent; nucleus; sequence-specific DNA binding transcription factor activity;
HOXB1	6	embryonic skeletal system morphogenesis; sequence-specific DNA binding; anterior/posterior pattern specification; transcription, DNA-dependent; nucleus; sequence-specific DNA binding transcription factor activity;
HOXA1	6	sequence-specific DNA binding; anterior/posterior pattern specification; anatomical structure morphogenesis; transcription, DNA-dependent; nucleus; sequence-specific DNA binding transcription factor activity;
HOXB3	5	embryonic skeletal system morphogenesis; anterior/posterior pattern specification; transcription, DNA-dependent; nucleus; sequence-specific DNA binding transcription factor activity;
HOXA11	5	sequence-specific DNA binding; anterior/posterior pattern specification; anatomical structure morphogenesis; transcription, DNA-dependent; sequence-specific DNA binding transcription factor activity;
HOXA2	5	sequence-specific DNA binding; anterior/posterior pattern specification; transcription, DNA-dependent; nucleus; sequence-specific DNA binding transcription factor activity;
HOXA9	5	sequence-specific DNA binding; anterior/posterior pattern specification; transcription, DNA-dependent; nucleus; sequence-specific DNA binding transcription factor activity;
LHX1	5	sequence-specific DNA binding; anterior/posterior pattern specification; anatomical structure morphogenesis; nucleus; sequence-specific DNA binding transcription factor activity;
TBX1	5	sequence-specific DNA binding; anterior/posterior pattern specification; transcription, DNA-dependent; nucleus; sequence-specific DNA binding transcription factor activity;

Genes shared at least 2 KEGG pathways with HOXA4 (count: 0)

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Region: chr7:27168126..27192217 View in gBrowse