ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	CTNND2
Symbol Alias	NPRAP, GT24
Approved Name	catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)
Location	5p15.2
Position	chr5:10971952-11904155, -
External Links	HGNC: 2516 Entrez Gene: 1501 Ensembl: ENSG00000169862 UCSC: uc003jfa.1
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by CNV

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 1)

ID	Location	Size	Band	Type	Inheritance
CNV_Elia[2010]_57	chr5:11540585-11571704 (NCBI Build 35 (hg17))	31120	5p15.2	Deletion (hemizygous)	Paternal

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 14)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 14)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0006355	regulation of transcription, DNA-dependent	Biological Process		158
GO:0007275	multicellular organismal development	Biological Process		71
GO:0006351	transcription, DNA-dependent	Biological Process		247
GO:0007165	signal transduction	Biological Process	TAS[9223106]	171
GO:0005912	adherens junction	Cellular Component		9
GO:0007158	neuron cell-cell adhesion	Biological Process		5
GO:0005737	cytoplasm	Cellular Component	TAS[9342840]	690
GO:0007155	cell adhesion	Biological Process	TAS[9223106]	86
GO:0005634	nucleus	Cellular Component		770
GO:0048167	regulation of synaptic plasticity	Biological Process		9
GO:0005515	protein binding	Molecular Function	IPI[19706687]	910
GO:0001763	morphogenesis of a branching structure	Biological Process		3
GO:0043204	perikaryon	Cellular Component		12
GO:0007612	learning	Biological Process		13

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with CTNND2 (count: 23)

Gene Symbol	Pathway Count	Pathway List
LPXN	7	regulation of transcription, DNA-dependent; transcription, DNA-dependent; signal transduction; cytoplasm; cell adhesion; nucleus; protein binding;
APBB1	6	regulation of transcription, DNA-dependent; transcription, DNA-dependent; signal transduction; cytoplasm; nucleus; protein binding;
CTNND1	6	regulation of transcription, DNA-dependent; transcription, DNA-dependent; cytoplasm; cell adhesion; nucleus; protein binding;
FLII	6	regulation of transcription, DNA-dependent; multicellular organismal development; transcription, DNA-dependent; cytoplasm; nucleus; protein binding;
MAPK1	6	transcription, DNA-dependent; signal transduction; cytoplasm; nucleus; protein binding; perikaryon;
DAXX	5	regulation of transcription, DNA-dependent; transcription, DNA-dependent; cytoplasm; nucleus; protein binding;
EEF1D	5	regulation of transcription, DNA-dependent; transcription, DNA-dependent; signal transduction; nucleus; protein binding;
GRHL1	5	regulation of transcription, DNA-dependent; multicellular organismal development; transcription, DNA-dependent; cytoplasm; nucleus;
HABP4	5	regulation of transcription, DNA-dependent; transcription, DNA-dependent; cytoplasm; nucleus; protein binding;
HOXB1	5	regulation of transcription, DNA-dependent; multicellular organismal development; transcription, DNA-dependent; cytoplasm; nucleus;
IGHMBP2	5	regulation of transcription, DNA-dependent; transcription, DNA-dependent; cytoplasm; nucleus; protein binding;
LMX1B	5	regulation of transcription, DNA-dependent; multicellular organismal development; transcription, DNA-dependent; nucleus; protein binding;
PRKAA1	5	regulation of transcription, DNA-dependent; transcription, DNA-dependent; signal transduction; nucleus; protein binding;
PSPC1	5	regulation of transcription, DNA-dependent; transcription, DNA-dependent; cytoplasm; nucleus; protein binding;
PTPN14	5	regulation of transcription, DNA-dependent; transcription, DNA-dependent; cytoplasm; nucleus; protein binding;
SCAI	5	regulation of transcription, DNA-dependent; transcription, DNA-dependent; cytoplasm; nucleus; protein binding;
TERF2IP	5	regulation of transcription, DNA-dependent; transcription, DNA-dependent; cytoplasm; nucleus; protein binding;
ARVCF	5	multicellular organismal development; cytoplasm; cell adhesion; nucleus; protein binding;
HOXA9	5	multicellular organismal development; transcription, DNA-dependent; cytoplasm; nucleus; protein binding;
NR4A2	5	transcription, DNA-dependent; signal transduction; cytoplasm; nucleus; protein binding;
PRKCB	5	transcription, DNA-dependent; signal transduction; cytoplasm; nucleus; protein binding;
TNR	5	signal transduction; neuron cell-cell adhesion; cytoplasm; cell adhesion; nucleus;
TH	5	cytoplasm; nucleus; protein binding; perikaryon; learning;

Genes shared at least 2 KEGG pathways with CTNND2 (count: 0)

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Region: chr5:10971952..11904155 View in gBrowse