ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	FANCC
Previous Symbol	FACC
Symbol Alias	FAC, FA3
Approved Name	Fanconi anemia, complementation group C
Location	9q22.3
Position	chr9:97861336-98079991, -
External Links	HGNC: 3584 Entrez Gene: 2176 Ensembl: ENSG00000158169 UCSC: uc004avh.2
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
9q22	chr9:90400000-102600000	3 (1/1/1)

Gene related GO terms (count: 12)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 12)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0007281	germ cell development	Biological Process		7
GO:0006461	protein complex assembly	Biological Process	TAS[9398857]	28
GO:0043240	Fanconi anaemia nuclear complex	Cellular Component		2
GO:0019430	removal of superoxide radicals	Biological Process		4
GO:0005829	cytosol	Cellular Component	IDA[9596688]	447
GO:0005737	cytoplasm	Cellular Component	TAS[9398857]	690
GO:0006289	nucleotide-excision repair	Biological Process		12
GO:0006281	DNA repair	Biological Process		62
GO:0002262	myeloid cell homeostasis	Biological Process		1
GO:0005515	protein binding	Molecular Function	IPI[12649160]	910
GO:0005634	nucleus	Cellular Component	TAS[9398857]	770
GO:0005654	nucleoplasm	Cellular Component		183

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with FANCC (count: 34)

Gene Symbol	Pathway Count	Pathway List
FANCA	7	protein complex assembly; Fanconi anaemia nuclear complex; cytoplasm; DNA repair; protein binding; nucleus; nucleoplasm;
MEN1	6	cytosol; cytoplasm; DNA repair; protein binding; nucleus; nucleoplasm;
DDB1	6	cytoplasm; nucleotide-excision repair; DNA repair; protein binding; nucleus; nucleoplasm;
RAD23B	6	cytoplasm; nucleotide-excision repair; DNA repair; protein binding; nucleus; nucleoplasm;
APC	5	protein complex assembly; cytosol; cytoplasm; protein binding; nucleus;
HMGA1	5	protein complex assembly; cytosol; protein binding; nucleus; nucleoplasm;
CCS	5	removal of superoxide radicals; cytosol; cytoplasm; protein binding; nucleus;
CEP164	5	cytosol; cytoplasm; DNA repair; protein binding; nucleus;
CHEK1	5	cytosol; DNA repair; protein binding; nucleus; nucleoplasm;
EGLN3	5	cytosol; cytoplasm; protein binding; nucleus; nucleoplasm;
IRF7	5	cytosol; cytoplasm; protein binding; nucleus; nucleoplasm;
IRF9	5	cytosol; cytoplasm; protein binding; nucleus; nucleoplasm;
MAPK1	5	cytosol; cytoplasm; protein binding; nucleus; nucleoplasm;
NEDD4L	5	cytosol; cytoplasm; protein binding; nucleus; nucleoplasm;
NUMA1	5	cytosol; cytoplasm; protein binding; nucleus; nucleoplasm;
PSMC3	5	cytosol; cytoplasm; protein binding; nucleus; nucleoplasm;
PTTG1	5	cytosol; cytoplasm; DNA repair; protein binding; nucleus;
RELA	5	cytosol; cytoplasm; protein binding; nucleus; nucleoplasm;
RFWD2	5	cytosol; cytoplasm; protein binding; nucleus; nucleoplasm;
SART1	5	cytosol; cytoplasm; protein binding; nucleus; nucleoplasm;
SMG1	5	cytosol; cytoplasm; DNA repair; protein binding; nucleus;
YAP1	5	cytosol; cytoplasm; protein binding; nucleus; nucleoplasm;
MMS19	5	cytoplasm; nucleotide-excision repair; DNA repair; protein binding; nucleus;
RAD9A	5	cytoplasm; DNA repair; protein binding; nucleus; nucleoplasm;
SMC1A	5	cytoplasm; DNA repair; protein binding; nucleus; nucleoplasm;
SMC3	5	cytoplasm; DNA repair; protein binding; nucleus; nucleoplasm;
SSRP1	5	cytoplasm; DNA repair; protein binding; nucleus; nucleoplasm;
TP53BP1	5	cytoplasm; DNA repair; protein binding; nucleus; nucleoplasm;
TRIP12	5	cytoplasm; DNA repair; protein binding; nucleus; nucleoplasm;
XRCC5	5	cytoplasm; DNA repair; protein binding; nucleus; nucleoplasm;
ERCC8	5	nucleotide-excision repair; DNA repair; protein binding; nucleus; nucleoplasm;
POLD3	5	nucleotide-excision repair; DNA repair; protein binding; nucleus; nucleoplasm;
POLD4	5	nucleotide-excision repair; DNA repair; protein binding; nucleus; nucleoplasm;
XPA	5	nucleotide-excision repair; DNA repair; protein binding; nucleus; nucleoplasm;

Genes shared at least 2 KEGG pathways with FANCC (count: 0)

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Region: chr9:97861336..98079991 View in gBrowse