ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	ZMAT5
Approved Name	zinc finger, matrin-type 5
Name Alias	U11/U12 snRNP 20K
Location	22cen-q12.3
Position	chr22:30126945-30163000, -
External Links	HGNC: 28046 Entrez Gene: 55954 Ensembl: ENSG00000100319 UCSC: uc003agn.2
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by PBA pathway

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 9)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 1)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0005681	spliceosomal complex	Cellular Component		51

GO terms by database search (count: 8)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0006397	mRNA processing	Biological Process		50
GO:0005737	cytoplasm	Cellular Component		690
GO:0008380	RNA splicing	Biological Process	IC[15146077]	65
GO:0008270	zinc ion binding	Molecular Function		323
GO:0003676	nucleic acid binding	Molecular Function		41
GO:0005634	nucleus	Cellular Component		770
GO:0005730	nucleolus	Cellular Component		243
GO:0005689	U12-type spliceosomal complex	Cellular Component	IDA[15146077]	16

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with ZMAT5 (count: 20)

Gene Symbol	Pathway Count	Pathway List
DHX15	7	mRNA processing; RNA splicing; nucleic acid binding; spliceosomal complex; nucleus; nucleolus; U12-type spliceosomal complex;
SF3A3	7	mRNA processing; RNA splicing; zinc ion binding; nucleic acid binding; spliceosomal complex; nucleus; nucleolus;
SF3B2	7	mRNA processing; RNA splicing; nucleic acid binding; spliceosomal complex; nucleus; nucleolus; U12-type spliceosomal complex;
EFTUD2	6	mRNA processing; cytoplasm; RNA splicing; spliceosomal complex; nucleus; nucleolus;
HNRNPA1	6	mRNA processing; cytoplasm; RNA splicing; spliceosomal complex; nucleus; nucleolus;
HNRNPA2B1	6	mRNA processing; cytoplasm; RNA splicing; spliceosomal complex; nucleus; nucleolus;
RBM4	6	mRNA processing; cytoplasm; RNA splicing; zinc ion binding; nucleus; nucleolus;
U2AF1	6	mRNA processing; RNA splicing; zinc ion binding; spliceosomal complex; nucleus; nucleolus;
HSPA8	5	mRNA processing; RNA splicing; spliceosomal complex; nucleus; nucleolus;
SCAF8	5	mRNA processing; RNA splicing; spliceosomal complex; nucleus; nucleolus;
SF3A1	5	mRNA processing; RNA splicing; spliceosomal complex; nucleus; nucleolus;
SF3A2	5	mRNA processing; RNA splicing; zinc ion binding; nucleic acid binding; spliceosomal complex;
SF3B3	5	mRNA processing; RNA splicing; nucleic acid binding; spliceosomal complex; U12-type spliceosomal complex;
SMNDC1	5	mRNA processing; cytoplasm; RNA splicing; spliceosomal complex; nucleus;
ZCRB1	5	mRNA processing; RNA splicing; zinc ion binding; spliceosomal complex; U12-type spliceosomal complex;
FUS	5	cytoplasm; RNA splicing; zinc ion binding; nucleus; nucleolus;
SLU7	5	cytoplasm; zinc ion binding; spliceosomal complex; nucleus; nucleolus;
DDX23	5	RNA splicing; nucleic acid binding; spliceosomal complex; nucleus; nucleolus;
SNRNP200	5	RNA splicing; nucleic acid binding; spliceosomal complex; nucleus; nucleolus;
SF1	5	zinc ion binding; nucleic acid binding; spliceosomal complex; nucleus; nucleolus;

Genes shared at least 2 KEGG pathways with ZMAT5 (count: 0)

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Region: chr22:30126945..30163000 View in gBrowse