ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	RSF1
Previous Symbol	HBXAP
Symbol Alias	XAP8, RSF-1, p325
Approved Name	remodeling and spacing factor 1
Previous Name	hepatitis B virus x associated protein
Location	11q14.1
Position	chr11:77371041-77532063, -
External Links	HGNC: 18118 Entrez Gene: 51773 Ensembl: ENSG00000048649 UCSC: uc001oyn.2
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
11q	chr11:53700000-135006516	2 (1/1/0)

Gene related GO terms (count: 16)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 16)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0016887	ATPase activity	Molecular Function	IDA[12972596]	14
GO:0016584	nucleosome positioning	Biological Process	IDA[9836642]	1
GO:0034080	CENP-A containing nucleosome assembly at centromere	Biological Process		4
GO:0031213	RSF complex	Cellular Component	IPI[9836642]	1
GO:0006338	chromatin remodeling	Biological Process	IDA[9836642]	10
GO:0006334	nucleosome assembly	Biological Process	IDA[12972596]	9
GO:0008270	zinc ion binding	Molecular Function		323
GO:0006352	DNA-dependent transcription, initiation	Biological Process	IDA[9836642]	8
GO:0005515	protein binding	Molecular Function	IPI[12972596]	910
GO:0005654	nucleoplasm	Cellular Component		183
GO:0005634	nucleus	Cellular Component	IDA[12972596]	770
GO:0050434	positive regulation of viral transcription	Biological Process	IDA[11788598]	6
GO:0042393	histone binding	Molecular Function	IDA[12972596]	9
GO:0043392	negative regulation of DNA binding	Biological Process	IDA[12972596]	5
GO:0045892	negative regulation of transcription, DNA-dependent	Biological Process	IDA[11944984]	64
GO:0045893	positive regulation of transcription, DNA-dependent	Biological Process	IDA[11788598]	80

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with RSF1 (count: 13)

Gene Symbol	Pathway Count	Pathway List
HINFP	7	zinc ion binding; protein binding; nucleoplasm; nucleus; histone binding; negative regulation of transcription, DNA-dependent; positive regulation of transcription, DNA-dependent;
MEN1	5	chromatin remodeling; protein binding; nucleoplasm; nucleus; negative regulation of transcription, DNA-dependent;
SMARCD3	5	chromatin remodeling; protein binding; nucleoplasm; nucleus; positive regulation of transcription, DNA-dependent;
H2AFX	5	nucleosome assembly; protein binding; nucleoplasm; nucleus; histone binding;
GATA6	5	zinc ion binding; protein binding; nucleoplasm; nucleus; negative regulation of transcription, DNA-dependent;
RNF20	5	zinc ion binding; protein binding; nucleus; histone binding; positive regulation of transcription, DNA-dependent;
ZBTB16	5	zinc ion binding; protein binding; nucleus; negative regulation of transcription, DNA-dependent; positive regulation of transcription, DNA-dependent;
ZNF423	5	zinc ion binding; protein binding; nucleus; negative regulation of transcription, DNA-dependent; positive regulation of transcription, DNA-dependent;
NCOA6	5	DNA-dependent transcription, initiation; protein binding; nucleoplasm; nucleus; positive regulation of transcription, DNA-dependent;
HMGA1	5	protein binding; nucleoplasm; nucleus; negative regulation of transcription, DNA-dependent; positive regulation of transcription, DNA-dependent;
ID2	5	protein binding; nucleus; negative regulation of DNA binding; negative regulation of transcription, DNA-dependent; positive regulation of transcription, DNA-dependent;
KDM1A	5	protein binding; nucleoplasm; nucleus; negative regulation of DNA binding; negative regulation of transcription, DNA-dependent;
RELA	5	protein binding; nucleoplasm; nucleus; negative regulation of transcription, DNA-dependent; positive regulation of transcription, DNA-dependent;

Genes shared at least 2 KEGG pathways with RSF1 (count: 0)

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Region: chr11:77371041..77532063 View in gBrowse