ADHDgene Database

Gene Report

Basic Info

Approved Symbol	BCAS2
Symbol Alias	DAM1, SPF27, Snt309
Approved Name	breast carcinoma amplified sequence 2
Location	1p13.2
Position	chr1:115110178-115124265, -
External Links	HGNC: 975 Entrez Gene: 10286 Ensembl: ENSG00000116752 UCSC: uc001efa.2
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by PBA pathway

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 6)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0005681	spliceosomal complex	Cellular Component	IDA[12169396]	51

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0008380	RNA splicing	Biological Process	TAS[9731529]	65
GO:0006397	mRNA processing	Biological Process		50
GO:0005730	nucleolus	Cellular Component		243
GO:0005515	protein binding	Molecular Function		910
GO:0000375	RNA splicing, via transesterification reactions	Biological Process	TAS[9731529]	11

Gene related KEGG pathways (count: 1)

ID	Name	No. of Genes in ADHDgene	Brief Description
hsa03040	Spliceosome	47	After transcription, eukaryotic mRNA precursors contain prot...... After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified. More...

Genes shared at least 5 GO terms with BCAS2 (count: 11)

Gene Symbol	Pathway Count	Pathway List
SF3A3	6	RNA splicing; mRNA processing; nucleolus; spliceosomal complex; protein binding; RNA splicing, via transesterification reactions;
DDX23	5	RNA splicing; nucleolus; spliceosomal complex; protein binding; RNA splicing, via transesterification reactions;
EFTUD2	5	RNA splicing; mRNA processing; nucleolus; spliceosomal complex; protein binding;
HNRNPA2B1	5	RNA splicing; mRNA processing; nucleolus; spliceosomal complex; protein binding;
HSPA8	5	RNA splicing; mRNA processing; nucleolus; spliceosomal complex; protein binding;
PRPF4	5	RNA splicing; nucleolus; spliceosomal complex; protein binding; RNA splicing, via transesterification reactions;
PRPF8	5	RNA splicing; mRNA processing; spliceosomal complex; protein binding; RNA splicing, via transesterification reactions;
SF3A1	5	RNA splicing; mRNA processing; nucleolus; spliceosomal complex; protein binding;
SF3B4	5	RNA splicing; mRNA processing; spliceosomal complex; protein binding; RNA splicing, via transesterification reactions;
SMNDC1	5	RNA splicing; mRNA processing; spliceosomal complex; protein binding; RNA splicing, via transesterification reactions;
U2AF1	5	RNA splicing; mRNA processing; nucleolus; spliceosomal complex; protein binding;

Genes shared at least 2 KEGG pathways with BCAS2 (count: 0)

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Region: chr1:115110178..115124265 View in gBrowse