ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	SUB1
Symbol Alias	PC4, p15, p14
Approved Name	SUB1 homolog (S. cerevisiae)
Location	5p13.3
Position	chr5:32531739-32604185, +
External Links	HGNC: 19985 Entrez Gene: 10923 Ensembl: ENSG00000113387 UCSC: uc003jhs.2
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
5p13	chr5:28900000-42500000	3 (1/1/1)

Gene related GO terms (count: 8)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 8)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0006357	regulation of transcription from RNA polymerase II promoter	Biological Process	IDA[8062391]	42
GO:0003713	transcription coactivator activity	Molecular Function	IDA[8062391]	52
GO:0005515	protein binding	Molecular Function	IPI[11389848]	910
GO:0003697	single-stranded DNA binding	Molecular Function	IDA[8062391]	5
GO:0005730	nucleolus	Cellular Component		243
GO:0006351	transcription, DNA-dependent	Biological Process		247
GO:0005634	nucleus	Cellular Component		770
GO:0005667	transcription factor complex	Cellular Component	IDA[8062391]	51

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with SUB1 (count: 12)

Gene Symbol	Pathway Count	Pathway List
POU2F3	6	regulation of transcription from RNA polymerase II promoter; protein binding; nucleolus; transcription, DNA-dependent; nucleus; transcription factor complex;
SMARCB1	6	regulation of transcription from RNA polymerase II promoter; transcription coactivator activity; protein binding; nucleolus; transcription, DNA-dependent; nucleus;
KAT5	6	transcription coactivator activity; protein binding; nucleolus; transcription, DNA-dependent; nucleus; transcription factor complex;
ATF6	5	regulation of transcription from RNA polymerase II promoter; transcription coactivator activity; protein binding; transcription, DNA-dependent; nucleus;
KDM1A	5	regulation of transcription from RNA polymerase II promoter; protein binding; transcription, DNA-dependent; nucleus; transcription factor complex;
SAP18	5	regulation of transcription from RNA polymerase II promoter; protein binding; nucleolus; transcription, DNA-dependent; nucleus;
SMARCD3	5	regulation of transcription from RNA polymerase II promoter; transcription coactivator activity; protein binding; transcription, DNA-dependent; nucleus;
SNW1	5	regulation of transcription from RNA polymerase II promoter; transcription coactivator activity; protein binding; nucleolus; nucleus;
UTF1	5	regulation of transcription from RNA polymerase II promoter; transcription coactivator activity; protein binding; transcription, DNA-dependent; nucleus;
HINFP	5	transcription coactivator activity; protein binding; nucleolus; transcription, DNA-dependent; nucleus;
NCOA6	5	transcription coactivator activity; protein binding; nucleolus; nucleus; transcription factor complex;
PHF2	5	transcription coactivator activity; protein binding; nucleolus; transcription, DNA-dependent; nucleus;

Genes shared at least 2 KEGG pathways with SUB1 (count: 0)

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Region: chr5:32531739..32604185 View in gBrowse