ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

Gene Report

Basic Info
Approved Symbol PRTG
Symbol Alias FLJ25756, IGDCC5
Approved Name protogenin
Previous Name "protogenin homolog (Gallus gallus)"
Name Alias "immunoglobulin superfamily, DCC subclass, member 5"
Location 15q21.3
Position chr15:55903744-56035288, -1
External Links HGNC: 26373
Entrez Gene: 283659
Ensembl: ENSG00000166450
UCSC: uc002adg.3
No. of Studies 1 (significant: 1; non-significant: 0; trend: 0)
Source Literature-origin; Mapped by Literature SNP

Gene related studies (count: 1)
Reference Statistical Values/Author Comments Result of Statistical Analysis
Wigg KG, 2008 haplotype AA P-value=0.007, X2 (df=1)=7.155; haplotype GC P-value=0.023, X2 (df=1)=5.208; P-value=0.033, X2 (df=3)=8.7482 in global chi-square test; P-value=0.026, chi-squared test on 2 df for haplotypes with frequency >10%=7.2969 of rs7165971 and rs12591646; haplotype AAC P-value=0.017, X2 (df=1)=5.670; P-value=0.018, X2 (df=6) =15.258 in global chi-square test; P-value=0.007, chi-squared test on 3 df for haplotypes with frequency >10%=12.051 of rs2414424, rs3985768 and rs1011061; showed significant association with ADHD Significant

Gene related SNPs (count: 82)

Literature-origin SNPs (count: 19)

LD-proxies (count: 63)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 2)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 2)

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with PRTG (count: 0)

Genes shared at least 2 KEGG pathways with PRTG (count: 0)

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Region: chr15:55903744..56035288 View in gBrowse
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