ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs16976466 dbSNP Ensembl
Location chr15:55972797(Fwd)
Variant Alleles T/C
Ancestral Allele T
Functional Annotation missense_variant; nc_transcript_variant; non_coding_exon_variant; splice_region_variant; upstream_gene_variant.
Polyphen Annotation: benign(ENST00000389286)
SIFT Annotation: tolerated(ENST00000389286)
Consequence to Transcript missense_variant(ENST00000389286)
upstream_gene_variant(ENST00000559842; ENST00000561465)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Wigg KG, 2008 G/A TDT P-value=0.584, X2=0.3 TDT P-value=0.584, X2=0.3 no evidence for association no evidence for association Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)

SNPs in LD with rs16976466 (count: 11) View in gBrowse (chr15:55967916..55998595 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 11)