ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	OMD
Symbol Alias	osteoadherin, SLRR2C
Approved Name	osteomodulin
Name Alias	"osteoadherin proteoglycan"
Location	9q22.31
Position	chr9:95176527-95186743, -1
External Links	HGNC: 8134 Entrez Gene: 4958 Ensembl: ENSG00000127083 UCSC: uc004asd.4
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
9q22	chr9:90400000-102600000	3 (1/1/1)

Gene related GO terms (count: 11)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 11)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0007155	cell adhesion	biological process	IEA	99
GO:0042339	keratan sulfate metabolic process	biological process	TAS	9
GO:0005796	Golgi lumen	cellular component	TAS	14
GO:0030203	glycosaminoglycan metabolic process	biological process	TAS	23
GO:0043202	lysosomal lumen	cellular component	TAS	12
GO:0005578	proteinaceous extracellular matrix	cellular component	IEA	51
GO:0042340	keratan sulfate catabolic process	biological process	TAS	3
GO:0044281	small molecule metabolic process	biological process	TAS	270
GO:0005576	extracellular region	cellular component	TAS	267
GO:0005975	carbohydrate metabolic process	biological process	TAS	59
GO:0018146	keratan sulfate biosynthetic process	biological process	TAS	8

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with OMD (count: 11)

Gene Symbol	Pathway Count	Pathway List
OGN	10	keratan sulfate metabolic process; Golgi lumen; glycosaminoglycan metabolic process; lysosomal lumen; proteinaceous extracellular matrix; keratan sulfate catabolic process; small molecule metabolic process; extracellular region; carbohydrate metabolic process; keratan sulfate biosynthetic process;
NCAN	7	cell adhesion; Golgi lumen; glycosaminoglycan metabolic process; lysosomal lumen; small molecule metabolic process; extracellular region; carbohydrate metabolic process;
ST3GAL4	6	keratan sulfate metabolic process; glycosaminoglycan metabolic process; small molecule metabolic process; extracellular region; carbohydrate metabolic process; keratan sulfate biosynthetic process;
GALNS	6	keratan sulfate metabolic process; glycosaminoglycan metabolic process; lysosomal lumen; keratan sulfate catabolic process; small molecule metabolic process; carbohydrate metabolic process;
GPC6	6	Golgi lumen; glycosaminoglycan metabolic process; lysosomal lumen; proteinaceous extracellular matrix; small molecule metabolic process; carbohydrate metabolic process;
GPC5	6	Golgi lumen; glycosaminoglycan metabolic process; lysosomal lumen; proteinaceous extracellular matrix; small molecule metabolic process; carbohydrate metabolic process;
B4GALT4	5	keratan sulfate metabolic process; glycosaminoglycan metabolic process; small molecule metabolic process; carbohydrate metabolic process; keratan sulfate biosynthetic process;
CHST5	5	keratan sulfate metabolic process; glycosaminoglycan metabolic process; small molecule metabolic process; carbohydrate metabolic process; keratan sulfate biosynthetic process;
B3GNT1	5	keratan sulfate metabolic process; glycosaminoglycan metabolic process; small molecule metabolic process; carbohydrate metabolic process; keratan sulfate biosynthetic process;
B4GALT6	5	keratan sulfate metabolic process; glycosaminoglycan metabolic process; small molecule metabolic process; carbohydrate metabolic process; keratan sulfate biosynthetic process;
CHST6	5	keratan sulfate metabolic process; glycosaminoglycan metabolic process; small molecule metabolic process; carbohydrate metabolic process; keratan sulfate biosynthetic process;

Genes shared at least 2 KEGG pathways with OMD (count: 0)

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Region: chr9:95176527..95186743 View in gBrowse