ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	CHST5
Symbol Alias	I-GLCNAC-6-ST, FLJ22167
Approved Name	carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5
Location	16q23.1
Position	chr16:75562428-75579326, -
External Links	HGNC: 1973 Entrez Gene: 23563 Ensembl: ENSG00000135702 UCSC: uc002fei.2
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
16q23.1-24.3	chr16:74100000-90354753	1 (1/0/0)

Gene related GO terms (count: 14)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 14)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0001517	N-acetylglucosamine 6-O-sulfotransferase activity	Molecular Function	IDA[10491328]	2
GO:0005794	Golgi apparatus	Cellular Component	IDA[12855678]	157
GO:0000139	Golgi membrane	Cellular Component		95
GO:0016021	integral to membrane	Cellular Component	NAS[10491328]	845
GO:0008146	sulfotransferase activity	Molecular Function	TAS[10491328]	5
GO:0030203	glycosaminoglycan metabolic process	Biological Process		20
GO:0018146	keratan sulfate biosynthetic process	Biological Process		8
GO:0006044	N-acetylglucosamine metabolic process	Biological Process	IDA[12218059]	2
GO:0005975	carbohydrate metabolic process	Biological Process		50
GO:0006790	sulfur compound metabolic process	Biological Process	IDA[10491328]	4
GO:0006477	protein sulfation	Biological Process	TAS[10491328]	2
GO:0042339	keratan sulfate metabolic process	Biological Process		9
GO:0031228	intrinsic to Golgi membrane	Cellular Component	NAS[12855678]	1
GO:0044281	small molecule metabolic process	Biological Process		248

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with CHST5 (count: 14)

Gene Symbol	Pathway Count	Pathway List
CHST6	11	N-acetylglucosamine 6-O-sulfotransferase activity; Golgi apparatus; Golgi membrane; integral to membrane; glycosaminoglycan metabolic process; keratan sulfate biosynthetic process; N-acetylglucosamine metabolic process; carbohydrate metabolic process; sulfur compound metabolic process; keratan sulfate metabolic process; small molecule metabolic process;
B4GALT4	7	Golgi membrane; integral to membrane; glycosaminoglycan metabolic process; keratan sulfate biosynthetic process; carbohydrate metabolic process; keratan sulfate metabolic process; small molecule metabolic process;
B4GALT6	7	Golgi membrane; integral to membrane; glycosaminoglycan metabolic process; keratan sulfate biosynthetic process; carbohydrate metabolic process; keratan sulfate metabolic process; small molecule metabolic process;
B3GAT3	6	Golgi apparatus; Golgi membrane; integral to membrane; glycosaminoglycan metabolic process; carbohydrate metabolic process; small molecule metabolic process;
DSE	6	Golgi apparatus; Golgi membrane; integral to membrane; glycosaminoglycan metabolic process; carbohydrate metabolic process; small molecule metabolic process;
B3GNT1	6	Golgi membrane; glycosaminoglycan metabolic process; keratan sulfate biosynthetic process; carbohydrate metabolic process; keratan sulfate metabolic process; small molecule metabolic process;
CHST9	6	Golgi membrane; integral to membrane; glycosaminoglycan metabolic process; carbohydrate metabolic process; sulfur compound metabolic process; small molecule metabolic process;
HS3ST2	6	Golgi membrane; integral to membrane; sulfotransferase activity; glycosaminoglycan metabolic process; carbohydrate metabolic process; small molecule metabolic process;
HS3ST5	6	Golgi membrane; integral to membrane; glycosaminoglycan metabolic process; carbohydrate metabolic process; protein sulfation; small molecule metabolic process;
ST3GAL4	6	Golgi membrane; glycosaminoglycan metabolic process; keratan sulfate biosynthetic process; carbohydrate metabolic process; keratan sulfate metabolic process; small molecule metabolic process;
B3GAT1	5	Golgi membrane; integral to membrane; glycosaminoglycan metabolic process; carbohydrate metabolic process; small molecule metabolic process;
CHPF	5	Golgi membrane; integral to membrane; glycosaminoglycan metabolic process; carbohydrate metabolic process; small molecule metabolic process;
OGN	5	glycosaminoglycan metabolic process; keratan sulfate biosynthetic process; carbohydrate metabolic process; keratan sulfate metabolic process; small molecule metabolic process;
OMD	5	glycosaminoglycan metabolic process; keratan sulfate biosynthetic process; carbohydrate metabolic process; keratan sulfate metabolic process; small molecule metabolic process;

Genes shared at least 2 KEGG pathways with CHST5 (count: 0)

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Region: chr16:75562428..75579326 View in gBrowse