ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	CHST9
Symbol Alias	GALNAC4ST-2, GALNAC-4-ST2
Approved Name	carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
Location	18q11.2
Position	chr18:24486446-24765289, -
External Links	HGNC: 19898 Entrez Gene: 83539 Ensembl: ENSG00000154080 UCSC: uc002kwe.2
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
18q11.2-12.3	chr18:19000000-43500000	1 (1/0/0)

Gene related GO terms (count: 13)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 13)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0000139	Golgi membrane	Cellular Component		95
GO:0001537	N-acetylgalactosamine 4-O-sulfotransferase activity	Molecular Function	IDA[11139592]	1
GO:0016051	carbohydrate biosynthetic process	Biological Process		3
GO:0030166	proteoglycan biosynthetic process	Biological Process		3
GO:0030203	glycosaminoglycan metabolic process	Biological Process	NAS[11139592]	20
GO:0030204	chondroitin sulfate metabolic process	Biological Process		7
GO:0005576	extracellular region	Cellular Component		240
GO:0005975	carbohydrate metabolic process	Biological Process		50
GO:0006790	sulfur compound metabolic process	Biological Process	IDA[11445554]	4
GO:0016021	integral to membrane	Cellular Component	NAS[11139592]	845
GO:0044281	small molecule metabolic process	Biological Process		248
GO:0042446	hormone biosynthetic process	Biological Process		3
GO:0030206	chondroitin sulfate biosynthetic process	Biological Process		4

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with CHST9 (count: 11)

Gene Symbol	Pathway Count	Pathway List
CHPF	7	Golgi membrane; glycosaminoglycan metabolic process; chondroitin sulfate metabolic process; carbohydrate metabolic process; integral to membrane; small molecule metabolic process; chondroitin sulfate biosynthetic process;
DSE	7	Golgi membrane; glycosaminoglycan metabolic process; chondroitin sulfate metabolic process; carbohydrate metabolic process; integral to membrane; small molecule metabolic process; chondroitin sulfate biosynthetic process;
B3GAT1	6	Golgi membrane; glycosaminoglycan metabolic process; chondroitin sulfate metabolic process; carbohydrate metabolic process; integral to membrane; small molecule metabolic process;
B3GAT3	6	Golgi membrane; glycosaminoglycan metabolic process; chondroitin sulfate metabolic process; carbohydrate metabolic process; integral to membrane; small molecule metabolic process;
CHST5	6	Golgi membrane; glycosaminoglycan metabolic process; carbohydrate metabolic process; sulfur compound metabolic process; integral to membrane; small molecule metabolic process;
CHST6	6	Golgi membrane; glycosaminoglycan metabolic process; carbohydrate metabolic process; sulfur compound metabolic process; integral to membrane; small molecule metabolic process;
B4GALT4	5	Golgi membrane; glycosaminoglycan metabolic process; carbohydrate metabolic process; integral to membrane; small molecule metabolic process;
B4GALT6	5	Golgi membrane; glycosaminoglycan metabolic process; carbohydrate metabolic process; integral to membrane; small molecule metabolic process;
HS3ST2	5	Golgi membrane; glycosaminoglycan metabolic process; carbohydrate metabolic process; integral to membrane; small molecule metabolic process;
HS3ST5	5	Golgi membrane; glycosaminoglycan metabolic process; carbohydrate metabolic process; integral to membrane; small molecule metabolic process;
ST3GAL4	5	Golgi membrane; glycosaminoglycan metabolic process; extracellular region; carbohydrate metabolic process; small molecule metabolic process;

Genes shared at least 2 KEGG pathways with CHST9 (count: 0)

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Region: chr18:24486446..24765289 View in gBrowse