ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs140701 dbSNP Ensembl
Location chr17:28538532(Fwd)
Variant Alleles C/T
Ancestral Allele C
Functional Annotation intron_variant; upstream_gene_variant.
Consequence to Transcript intron_variant(ENST00000261707; ENST00000394821; ENST00000401766)
upstream_gene_variant(ENST00000579221)
No. of Studies 3 (significant: 1; non-significant: 2; trend: 0)
Source Literature-origin

SNP related studies (count: 3)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Brookes K, 2006 A/G UNPHASED TDT P-value=0.315; WHAP TDT P-value=0.349 UNPHASED TDT P-value=0.315; WHAP TDT P-value=0.349 no significant association was observed no significant association was observed Non-significant
Ilott NE, 2010 QTDT AT P-value=0.09, X2=2.96, df=1, QTDT AW P-va...... QTDT AT P-value=0.09, X2=2.96, df=1, QTDT AW P-value=0.08, X2=3.03, df=1 at age 2; QTDT AT P-value=0.38, X2=0, df=1, QTDT AW P-value=0.07, X2=3.24, df=1 at age 3 More... modest, nominally significant associations in the AW test at...... modest, nominally significant associations in the AW test at age 3 More... Non-significant
Nyman ES, 2007 Logistic regression for single markers: adjusted for sex: P-...... Logistic regression for single markers: adjusted for sex: P-value=0.0393, OR=0.51, 95%CI=0.27-0.97 for 12vs.22; Males: P-value=0.0483, OR=0.53, 95%CI=0.28-1.00 for 12vs.11 More... nominally associated, but the results were considered inconc...... nominally associated, but the results were considered inconclusive because the effect was seen only for heterozygotes, and no risk (or protective) allele could be identified. More... Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs140701 (count: 51) View in gBrowse (chr17:28344276..28550732 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 51)