ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs1042173 dbSNP Ensembl
Location chr17:28525011(Fwd)
Variant Alleles A/C
Ancestral Allele C
Functional Annotation 3_prime_UTR_variant; downstream_gene_variant; NMD_transcript_variant.
Consequence to Transcript 3_prime_UTR_variant(ENST00000261707; ENST00000401766; ENST00000579221)
downstream_gene_variant(ENST00000394821; ENST00000578609)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Banerjee E, 2009 G482T HHRR P-value=0.353; TDT P-value=0.25 HHRR P-value=0.353; TDT P-value=0.25 This polymorphism is not associated with risk of ADHD. This polymorphism is not associated with risk of ADHD. Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)

SNPs in LD with rs1042173 (count: 80) View in gBrowse (chr17:28328819..28550732 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 80)