ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs11080121 dbSNP Ensembl
Location chr17:28528842(Fwd)
Variant Alleles T/C
Ancestral Allele T
Functional Annotation intron_variant; nc_transcript_variant; NMD_transcript_variant; upstream_gene_variant.
Consequence to Transcript intron_variant(ENST00000261707; ENST00000394821; ENST00000401766; ENST00000578609; ENST00000579221)
nc_transcript_variant(ENST00000578609)
NMD_transcript_variant(ENST00000579221)
upstream_gene_variant(ENST00000581633)
No. of Studies 1 (significant: 1; non-significant: 0; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Ilott NE, 2010 QTDT AT P-value=0.14, X2=2.16, df=1, QTDT AW P-va...... QTDT AT P-value=0.14, X2=2.16, df=1, QTDT AW P-value=0.1, X2=2.71, df=1 at age 2; QTDT AT P-value=0.23, X2=0.12, df=1, QTDT AW P-value=0.03, X2=4.77, df=1 at age 3 More... modest, nominally significant associations in the AW test at...... modest, nominally significant associations in the AW test at age 3 More... Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs11080121 (count: 78) View in gBrowse (chr17:28330280..28550732 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 78)