ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Region Report

Basic Info

Region Name	5q33.3
Chromosome Position	chr5:155700000-159900000
#studies (significant/non-significant/trend)	1(1/0/0)

Region related studies (count: 1)

Reference	Markers	Statistical Values	Author Comments	Result of Statistical Analysis
Arcos-Burgos M, 2004 (a)	D5S1480, D5S2117, D5S490	Linkage of genomewide scan: LOD=1.45, MLS=2.41, NPL=1.6 with...... Linkage of genomewide scan: LOD=1.45, MLS=2.41, NPL=1.6 with marker D5S1480; Family-specific linkage of fine mapping: LOD=1.5, NPL_all Z^b=11.5 with marker D5S2117; Linkage of fine mapping in combined families: LOD=8.2, NPL_all Z^b <2.0 with marker D5S490 More...	significant linkage significant linkage	Significant

Region related genes (count: 38)

Literature-origin genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
ADRA1B	adrenoceptor alpha 1B	5q33.3	2(1/1/0)

Genes from other sources (count: 37)

Approved Symbol	Approved Name	Location
APOOP1	apolipoprotein O pseudogene 1	5q33.3
PPP1R2P3	protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene 3	5q33.3
RNU6-556P	RNA, U6 small nuclear 556, pseudogene	5q33.3
C5orf54	chromosome 5 open reading frame 54	5q33.3
MARK2P11	MAP/microtubule affinity-regulating kinase 2 pseudogene 11	5q33.3
ADAM19	ADAM metallopeptidase domain 19	5q33.3
HAVCR2	hepatitis A virus cellular receptor 2	5q34
EBF1	early B-cell factor 1	5q34
RN7SL295P	RNA, 7SL, cytoplasmic 295, pseudogene	5q33.3
TIMD4	T-cell immunoglobulin and mucin domain containing 4	5q33.3
MED7	mediator complex subunit 7	5q33.3
RNU6-260P	RNA, U6 small nuclear 260, pseudogene	5q33.3
SOX30	SRY (sex determining region Y)-box 30	5q33
RNU4ATAC2P	RNA, U4atac small nuclear 2, pseudogene	5q33.3
HAVCR1	hepatitis A virus cellular receptor 1	5q33.2
FAM71B	family with sequence similarity 71, member B	5q33.3
LSM11	LSM11, U7 small nuclear RNA associated	5q33.3
PTTG1	pituitary tumor-transforming 1	5q35.1
CCNJL	cyclin J-like	5q33.3
IL12B	interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)	5q31.1-q33.1
SLU7	SLU7 splicing factor homolog (S. cerevisiae)	5q33.3
FNDC9	fibronectin type III domain containing 9	5q33.3
CLINT1	clathrin interactor 1	5q33.3
THG1L	tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	5q33.3
RNF145	ring finger protein 145	5q33.3
RNU6-390P	RNA, U6 small nuclear 390, pseudogene	5q33.3
GAPDHP40	glyceraldehyde 3 phosphate dehydrogenase pseudogene 40	5q33.3
TTC1	tetratricopeptide repeat domain 1	5q32-q33.2
C5orf52	chromosome 5 open reading frame 52	5q33.3
C1QTNF2	C1q and tumor necrosis factor related protein 2	5q33.3
CYFIP2	cytoplasmic FMR1 interacting protein 2	5q34
RNU2-48P	RNA, U2 small nuclear 48, pseudogene	5q33.3
ITK	IL2-inducible T-cell kinase	5q31-q32
FABP6	fatty acid binding protein 6, ileal	5q23-q35
PWWP2A	PWWP domain containing 2A	5q33.3
UBLCP1	ubiquitin-like domain containing CTD phosphatase 1	5q33.3
NIPAL4	NIPA-like domain containing 4	5q33.3

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Region: chr5:155700000..159900000 View in gBrowse