ADHDgene Database

Gene Report

Basic Info

Approved Symbol	LHX6
Symbol Alias	LHX6.1
Approved Name	LIM homeobox 6
Location	9q33.2
Position	chr9:124964856-124991220, -
External Links	HGNC: 21735 Entrez Gene: 26468 Ensembl: ENSG00000106852 UCSC: uc004blx.3
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
9q33	chr9:117700000-130300000	2 (1/1/0)

Gene related GO terms (count: 11)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function	NAS[10393337]	132
GO:0005634	nucleus	Cellular Component		770
GO:0006351	transcription, DNA-dependent	Biological Process		247
GO:0008270	zinc ion binding	Molecular Function		323
GO:0021799	cerebral cortex radially oriented cell migration	Biological Process		1
GO:0021800	cerebral cortex tangential migration	Biological Process		1
GO:0021853	cerebral cortex GABAergic interneuron migration	Biological Process		3
GO:0021877	forebrain neuron fate commitment	Biological Process		1
GO:0021884	forebrain neuron development	Biological Process		2
GO:0043565	sequence-specific DNA binding	Molecular Function		72
GO:0048469	cell maturation	Biological Process		6

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with LHX6 (count: 6)

Gene Symbol	Pathway Count	Pathway List
IKZF1	5	sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent; zinc ion binding; sequence-specific DNA binding;
LHX2	5	sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent; zinc ion binding; sequence-specific DNA binding;
LMX1B	5	sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent; zinc ion binding; sequence-specific DNA binding;
PRDM1	5	sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent; zinc ion binding; sequence-specific DNA binding;
TSHZ2	5	sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent; zinc ion binding; sequence-specific DNA binding;
ZNF24	5	sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent; zinc ion binding; sequence-specific DNA binding;

Genes shared at least 2 KEGG pathways with LHX6 (count: 0)

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Region: chr9:124964856..124991220 View in gBrowse