ADHDgene Database

Hot Results

Quick Search

Keyword:
Type:

Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	CDH6
Approved Name	cadherin 6, type 2, K-cadherin (fetal kidney)
Name Alias	K-Cadherin
Location	5p13.3
Position	chr5:31193796-31329253, +
External Links	HGNC: 1765 Entrez Gene: 1004 Ensembl: ENSG00000113361 UCSC: uc003jhe.1
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
5p13	chr5:28900000-42500000	3 (1/1/1)

Gene related GO terms (count: 11)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 11)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0016021	integral to membrane	Cellular Component		845
GO:0007156	homophilic cell adhesion	Biological Process		27
GO:0034332	adherens junction organization	Biological Process		9
GO:0034329	cell junction assembly	Biological Process		13
GO:0045216	cell-cell junction organization	Biological Process		10
GO:0005634	nucleus	Cellular Component		770
GO:0005509	calcium ion binding	Molecular Function		124
GO:0005737	cytoplasm	Cellular Component		690
GO:0005730	nucleolus	Cellular Component		243
GO:0007155	cell adhesion	Biological Process	TAS[7743525]	86
GO:0005886	plasma membrane	Cellular Component		772

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with CDH6 (count: 15)

Gene Symbol	Pathway Count	Pathway List
CDH15	8	integral to membrane; homophilic cell adhesion; adherens junction organization; cell junction assembly; cell-cell junction organization; calcium ion binding; cell adhesion; plasma membrane;
CDH2	8	integral to membrane; homophilic cell adhesion; adherens junction organization; cell junction assembly; cell-cell junction organization; calcium ion binding; cell adhesion; plasma membrane;
CDH12	7	integral to membrane; homophilic cell adhesion; adherens junction organization; cell junction assembly; cell-cell junction organization; calcium ion binding; plasma membrane;
PVRL1	7	integral to membrane; homophilic cell adhesion; adherens junction organization; cell junction assembly; cell-cell junction organization; cell adhesion; plasma membrane;
CDH13	7	homophilic cell adhesion; adherens junction organization; cell junction assembly; cell-cell junction organization; calcium ion binding; cytoplasm; plasma membrane;
CDH4	7	homophilic cell adhesion; adherens junction organization; cell junction assembly; cell-cell junction organization; calcium ion binding; cell adhesion; plasma membrane;
CTNND1	7	adherens junction organization; cell junction assembly; cell-cell junction organization; nucleus; cytoplasm; cell adhesion; plasma membrane;
CADM1	6	integral to membrane; homophilic cell adhesion; adherens junction organization; cell junction assembly; cell-cell junction organization; plasma membrane;
DSC3	6	integral to membrane; homophilic cell adhesion; calcium ion binding; cytoplasm; cell adhesion; plasma membrane;
CDHR5	5	integral to membrane; homophilic cell adhesion; calcium ion binding; cell adhesion; plasma membrane;
CELSR2	5	integral to membrane; homophilic cell adhesion; calcium ion binding; cytoplasm; plasma membrane;
DSC2	5	integral to membrane; homophilic cell adhesion; calcium ion binding; cell adhesion; plasma membrane;
DSG2	5	integral to membrane; homophilic cell adhesion; calcium ion binding; cell adhesion; plasma membrane;
NF2	5	cell-cell junction organization; nucleus; cytoplasm; nucleolus; plasma membrane;
PERP	5	nucleus; cytoplasm; nucleolus; cell adhesion; plasma membrane;

Genes shared at least 2 KEGG pathways with CDH6 (count: 0)

View in gBrowse

Region: chr5:31193796..31329253 View in gBrowse