ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	CDH12
Symbol Alias	Br-cadherin, CDHB
Approved Name	cadherin 12, type 2 (N-cadherin 2)
Location	5p14.3
Position	chr5:21750777-22853731, -
External Links	HGNC: 1751 Entrez Gene: 1010 Ensembl: ENSG00000154162 UCSC: uc003jgk.2
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by CNV

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 1)

ID	Location	Size	Band	Type	Inheritance
CNV_Elia[2010]_50	chr5:22419706-22577100 (NCBI Build 35 (hg17))	157395	5p14.3	Deletion (hemizygous)	Paternal

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 8)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 8)

ID	Name	Type	No. of Genes in ADHDgene
GO:0016021	integral to membrane	Cellular Component	845
GO:0007156	homophilic cell adhesion	Biological Process	27
GO:0005886	plasma membrane	Cellular Component	772
GO:0005509	calcium ion binding	Molecular Function	124
GO:0045216	cell-cell junction organization	Biological Process	10
GO:0034332	adherens junction organization	Biological Process	9
GO:0034329	cell junction assembly	Biological Process	13
GO:0016337	cell-cell adhesion	Biological Process	13

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with CDH12 (count: 10)

Gene Symbol	Pathway Count	Pathway List
CDH15	7	integral to membrane; homophilic cell adhesion; plasma membrane; calcium ion binding; cell-cell junction organization; adherens junction organization; cell junction assembly;
CDH2	7	integral to membrane; homophilic cell adhesion; plasma membrane; calcium ion binding; cell-cell junction organization; adherens junction organization; cell junction assembly;
CDH6	7	integral to membrane; homophilic cell adhesion; plasma membrane; calcium ion binding; cell-cell junction organization; adherens junction organization; cell junction assembly;
PVRL1	7	integral to membrane; homophilic cell adhesion; plasma membrane; cell-cell junction organization; adherens junction organization; cell junction assembly; cell-cell adhesion;
CADM1	6	integral to membrane; homophilic cell adhesion; plasma membrane; cell-cell junction organization; adherens junction organization; cell junction assembly;
CDH13	6	homophilic cell adhesion; plasma membrane; calcium ion binding; cell-cell junction organization; adherens junction organization; cell junction assembly;
CDH4	6	homophilic cell adhesion; plasma membrane; calcium ion binding; cell-cell junction organization; adherens junction organization; cell junction assembly;
CDH19	5	integral to membrane; homophilic cell adhesion; plasma membrane; calcium ion binding; cell-cell adhesion;
DSG1	5	integral to membrane; homophilic cell adhesion; plasma membrane; calcium ion binding; cell-cell adhesion;
CTNND1	5	plasma membrane; cell-cell junction organization; adherens junction organization; cell junction assembly; cell-cell adhesion;

Genes shared at least 2 KEGG pathways with CDH12 (count: 0)

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Region: chr5:21750777..22853731 View in gBrowse