ADHDgene Database

Gene Report

Basic Info

Approved Symbol	ARID3C
Approved Name	AT rich interactive domain 3C (BRIGHT-like)
Previous Name	AT rich interactive domain 3C (BRIGHT- like)
Location	9p13.2
Position	chr9:34621376-34628104, -
External Links	HGNC: 21209 Entrez Gene: 138715 Ensembl: ENSG00000205143 UCSC: uc011lon.1
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by LD-proxy

Gene related studies (count: 0)

Gene related SNPs (count: 2)

rs_ID	Location	Functional Annotation
rs3802427	Chr9:34618641(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant; upstream_gene_variant
rs10814129	Chr9:34623718(Fwd)	intron_variant; splice_region_variant; upstream_gene_variant

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 7)

ID	Name	Type	No. of Genes in ADHDgene
GO:0005634	nucleus	Cellular Component	770
GO:0003682	chromatin binding	Molecular Function	48
GO:0006351	transcription, DNA-dependent	Biological Process	247
GO:0005737	cytoplasm	Cellular Component	690
GO:0045944	positive regulation of transcription from RNA polymerase II promoter	Biological Process	131
GO:0045121	membrane raft	Cellular Component	22
GO:0003677	DNA binding	Molecular Function	220

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with ARID3C (count: 6)

Gene Symbol	Pathway Count	Pathway List
ATXN1	5	nucleus; transcription, DNA-dependent; cytoplasm; positive regulation of transcription from RNA polymerase II promoter; DNA binding;
HOXB1	5	nucleus; transcription, DNA-dependent; cytoplasm; positive regulation of transcription from RNA polymerase II promoter; DNA binding;
IKZF1	5	nucleus; transcription, DNA-dependent; cytoplasm; positive regulation of transcription from RNA polymerase II promoter; DNA binding;
MEN1	5	nucleus; chromatin binding; transcription, DNA-dependent; cytoplasm; positive regulation of transcription from RNA polymerase II promoter;
RELA	5	nucleus; chromatin binding; cytoplasm; positive regulation of transcription from RNA polymerase II promoter; DNA binding;
SREBF1	5	nucleus; chromatin binding; transcription, DNA-dependent; positive regulation of transcription from RNA polymerase II promoter; DNA binding;

Genes shared at least 2 KEGG pathways with ARID3C (count: 0)

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Region: chr9:34621376..34628104 View in gBrowse