ADHDgene Database

Gene Report

Basic Info

Approved Symbol	GCNT2
Previous Symbol	NACGT1, II, GCNT5, CCAT
Symbol Alias	IGNT, NAGCT1, bA421M1.1, bA360O19.2, ULG3
Approved Name	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
Previous Name	glucosaminyl (N-acetyl) transferase 5, "glucosaminyl (N-acetyl) transferase 2, I-branching enzyme", "glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (Ii blood group)", "cataract, congenital"
Name Alias	Ii blood group, "unassigned linkage group 3"
Location	6p24.2
Position	chr6:10492456-10629601, +
External Links	HGNC: 4204 Entrez Gene: 2651 Ensembl: ENSG00000111846 UCSC: uc003mze.2
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by CNV

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 2)

ID	Location	Size	Band	Type	Inheritance
CNV_Lionel[2011]_15	chr6:0-0 (NCBI36 / hg18)	92	6p24.2	Loss	M
CNV_Lionel[2011]_14	chr6:0-0 (NCBI36 / hg18)	262	6p24.2	Gain	M

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 7)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0000139	Golgi membrane	Cellular Component		95
GO:0006024	glycosaminoglycan biosynthetic process	Biological Process	TAS[8449405]	7
GO:0016021	integral to membrane	Cellular Component		845
GO:0006486	protein glycosylation	Biological Process		15
GO:0007275	multicellular organismal development	Biological Process	TAS[9134435]	71
GO:0008109	N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity	Molecular Function		1
GO:0016020	membrane	Cellular Component	TAS[8449405]	139

Gene related KEGG pathways (count: 2)

ID	Name	No. of Genes in ADHDgene	Brief Description
hsa00601	Glycosphingolipid biosynthesis - lacto and neolacto series	5
hsa01100	Metabolic pathways	237

Genes shared at least 5 GO terms with GCNT2 (count: 0)

Genes shared at least 2 KEGG pathways with GCNT2 (count: 4)

Gene Symbol	Pathway Count	Pathway List
B3GNT1	2	Glycosphingolipid biosynthesis - lacto and neolacto series; Metabolic pathways;
B4GALT4	2	Glycosphingolipid biosynthesis - lacto and neolacto series; Metabolic pathways;
FUT4	2	Glycosphingolipid biosynthesis - lacto and neolacto series; Metabolic pathways;
ST3GAL4	2	Glycosphingolipid biosynthesis - lacto and neolacto series; Metabolic pathways;

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Region: chr6:10492456..10629601 View in gBrowse