ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs907094 dbSNP Ensembl
Location chr17:37790371(Fwd)
Variant Alleles G/A
Ancestral Allele G
Functional Annotation downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000580772; ENST00000582680)
intron_variant(ENST00000254079; ENST00000394265; ENST00000394267; ENST00000492037; ENST00000579000; ENST00000580029; ENST00000580825; ENST00000583446)
nc_transcript_variant(ENST00000492037; ENST00000580029; ENST00000583446)
upstream_gene_variant(ENST00000336308; ENST00000394250; ENST00000544210; ENST00000577248; ENST00000578232; ENST00000578254; ENST00000578577; ENST00000579479; ENST00000580551; ENST00000580611; ENST00000581894; ENST00000583582; ENST00000583718; ENST00000585214)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Laurin N, 2008(c) A/G P-value=0.933, X2 (1 df)=0.007 in the categorical...... P-value=0.933, X2 (1 df)=0.007 in the categorical analysis; P-value>0.05 in the quantitative analysis More... no significant evidence of association no significant evidence of association Non-significant

SNP related genes (count: 2)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 1)


SNPs in LD with rs907094 (count: 38) View in gBrowse (chr17:37601755..37843681 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 38)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014