ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	ZNF544
Symbol Alias	AF020591
Approved Name	zinc finger protein 544
Name Alias	zinc finger protein AF020591
Location	19q13.43
Position	chr19:58740070-58775010, +
External Links	HGNC: 16759 Entrez Gene: 27300 Ensembl: ENSG00000198131 UCSC: uc010euo.2
No. of Studies	1 (significant: 0; non-significant: 0; trend: 1)
Source	Literature-origin; Mapped by LD-proxy; Mapped by literature SNP

Gene related studies (count: 1)

Reference	Statistical Values/Author Comments	Result of Statistical Analysis
Lasky-Su J, 2008	1 flanking SNPs of this gene with P-value<1E-5.	Trend

Gene related SNPs (count: 14)

Literature-origin SNPs (count: 1)

rs_ID	Location	Functional Annotation	No. of Studies (significant/non-significant/trend)
rs260461	Chr19:58770883(Fwd)	3_prime_UTR_variant; NMD_transcript_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant	1(0/0/1)

LD-proxies (count: 13)

rs_ID	Location	Functional Annotation
rs11881516	Chr19:58757182(Fwd)	NMD_transcript_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant
rs260454	Chr19:58767168(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant
rs260456	Chr19:58767565(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant
rs260457	Chr19:58767697(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant
rs260462	Chr19:58774071(Fwd)	3_prime_UTR_variant; NMD_transcript_variant; downstream_gene_variant; intron_variant; missense_variant; nc_transcript_variant; upstream_gene_variant
rs260468	Chr19:58776630(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant
rs392644	Chr19:58780503(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant
rs2449632	Chr19:58781379(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant
rs439333	Chr19:58783027(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant
rs260453	Chr19:58767151(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant
rs260452	Chr19:58766874(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant
rs260484	Chr19:58758451(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant
rs260486	Chr19:58753937(Fwd)	NMD_transcript_variant; intron_variant; nc_transcript_variant; upstream_gene_variant

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 5)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 5)

ID	Name	Type	No. of Genes in ADHDgene
GO:0008270	zinc ion binding	Molecular Function	323
GO:0006355	regulation of transcription, DNA-dependent	Biological Process	158
GO:0006351	transcription, DNA-dependent	Biological Process	247
GO:0005634	nucleus	Cellular Component	770
GO:0003677	DNA binding	Molecular Function	220

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with ZNF544 (count: 61)

Gene Symbol	Pathway Count	Pathway List
HINFP	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
IGHMBP2	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
PRDM10	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZBTB22	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZBTB26	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZBTB3	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZBTB34	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZBTB37	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZBTB43	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZBTB44	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZBTB6	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZBTB9	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZFP1	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZFP2	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZFP37	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF142	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF169	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF214	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF215	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF257	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF263	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF264	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF276	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF286B	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF354B	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF354C	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF454	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF469	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF48	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF484	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF510	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF511	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF521	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF532	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF57	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF618	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF624	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF629	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF646	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF648	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF664	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF668	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF669	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF670	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF676	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF688	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF689	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF70	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF705E	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF74	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF75A	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF764	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF77	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF771	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF778	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF782	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF785	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF79	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF805	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF879	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;
ZNF883	5	zinc ion binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; nucleus; DNA binding;

Genes shared at least 2 KEGG pathways with ZNF544 (count: 0)

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Region: chr19:58740070..58775010 View in gBrowse