ADHDgene Database

SNP Report

Basic Info

Name	rs439333 dbSNP Ensembl
Location	Chr19:58783027(Fwd)
Variant Alleles	T/A
Ancestral Allele	T
Functional Annotation	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000600029) downstream_gene_variant(ENST00000595301) intron_variant(ENST00000597230; ENST00000595981; ENST00000600029; ENST00000596929) nc_transcript_variant(ENST00000597230)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
ZNF544	zinc finger protein 544	19q13.43	1(0/0/1)

SNPs in LD with rs439333 (count: 1) View in gBrowse (chr19:58770883..58783027 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs260461	3_prime_UTR_variant; NMD_transcript_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant	1(0/0/1)	1.0[CHB]