ADHDgene Database

SNP Report

Basic Info

Name	rs6892282 dbSNP Ensembl
Location	Chr5:159360485(Fwd)
Variant Alleles	G/T
Ancestral Allele	T
Functional Annotation	intron_variant.
Consequence to Transcript	intron_variant(ENST00000306675)
No. of Studies	1 (significant: 0; non-significant: 1; trend: 0)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Hawi, Z., 2012	G:T	G	P-value=0.1151, X²=2.48, OR=1.23, 95% CI=0.95-1.5...... P-value=0.1151, X²=2.48, OR=1.23, 95% CI=0.95-1.59 More...	The marker did not show significant association with ADHD. The marker did not show significant association with ADHD.	Non-significant

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
ADRA1B	adrenergic, alpha-1B-, receptor	5q33.3	2(1/1/0)

SNPs in LD with rs6892282 (count: 5) View in gBrowse (chr5:159339533..159383271 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs6884105	intron_variant	1(0/1/0)	0.88[JPT]
rs7737796	intron_variant	1(1/0/0)	0.837[ASW]; 1.0[CHB]; 0.936[CHD]; 0.865[GIH]; 1.0[JPT]; 0.831[TSI]; 0.857[YRI]
rs12653825	intron_variant; upstream_gene_variant	1(0/1/0)	0.82[GIH]

rs_ID	Functional Annotation	r²[population]
rs11952941	intron_variant	0.874[CHB]; 1.0[CHD]; 1.0[JPT]
rs1019920	upstream_gene_variant	0.842[CHD]; 0.827[GIH]