ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs363006 dbSNP Ensembl
Location Chr20:10280083(Fwd)
Variant Alleles G/A
Ancestral Allele G
Functional Annotation intron_variant; nc_transcript_variant.
Consequence to Transcript intron_variant(ENST00000421143; ENST00000254976; ENST00000453544; ENST00000495883; ENST00000304886)
nc_transcript_variant(ENST00000421143; ENST00000453544; ENST00000495883)
No. of Studies 6 (significant: 0; non-significant: 6; trend: 0)
Source Literature-origin

SNP related studies (count: 6)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Renner TJ, 2008 FAMHAP P-value=1 FAMHAP P-value=1 no significant preferential transmissions to affected childr...... no significant preferential transmissions to affected children with ADHD were detected More... Non-significant
Zhang HY, 2011 TDT P-value>0.05 TDT P-value>0.05 showed a non-significant association with ADHD showed a non-significant association with ADHD Non-significant
Feng Y, 2005(b) G/A allelic TDT P-value=0.304, X2=1.059 in Irvine sam...... allelic TDT P-value=0.304, X2=1.059 in Irvine sample; allelic TDT P-value=0.925, X2=0.009 in Toronto sample More... there was no significant result both in the Toronto sample a...... there was no significant result both in the Toronto sample and the Irvine sample More... Non-significant
Gizer IR, 2009 Meta-analysis model: Random: OR=0.99, 95% CI=0.86-1.15, P-va...... Meta-analysis model: Random: OR=0.99, 95% CI=0.86-1.15, P-value=0.547; Q-statistic: P-value=0.326, I2=14 More... no evidence to suggest an association between this polymorph...... no evidence to suggest an association between this polymorphisms and ADHD More... Non-significant
Kim JW, 2007 G/A A Combined TDT P-value=0.43 (OR=1.09); Single marker analysis ...... Combined TDT P-value=0.43 (OR=1.09); Single marker analysis FBAT P-value=0.741; Exploratory analyses FBAT P-value=0.369 for co-morbid CD, P-value=0.858 for co-morbid MDD, P-value=0.688 for co-morbid BD More... No association was found between ADHD or co-morbidities of A...... No association was found between ADHD or co-morbidities of ADHD and this SNP More... Non-significant
Brookes K, 2006 A/G UNPHASED TDT P-value=0.204; WHAP TDT P-value=0.729 UNPHASED TDT P-value=0.204; WHAP TDT P-value=0.729 no significant association was observed no significant association was observed Non-significant

SNP related genes (count: 2)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 1)


SNPs in LD with rs363006 (count: 7) View in gBrowse (chr20:10250288..10280083 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 7)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014