ADHDgene Database

SNP Report

Basic Info

Name	rs362999 dbSNP Ensembl
Location	Chr20:10278960(Fwd)
Variant Alleles	C/T
Ancestral Allele	T
Functional Annotation	intron_variant; nc_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000421143; ENST00000254976; ENST00000453544; ENST00000495883; ENST00000304886) nc_transcript_variant(ENST00000421143; ENST00000453544; ENST00000495883)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
SNAP25	synaptosomal-associated protein, 25kDa	20p12-p11.2	18(13/5/0)

Approved Symbol	Approved Name	Location
SNAP25-AS1	SNAP25 antisense RNA 1	20p12.2

SNPs in LD with rs362999 (count: 4) View in gBrowse (chr20:10256252..10278960 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs362998	downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; synonymous_variant	2(1/1/0)	1.0[CEU]; 0.833[CHB]; 1.0[JPT]; 0.941[YRI]
rs362585	intron_variant; nc_transcript_variant	1(1/0/0)	0.91[CHB]; 1.0[JPT]
rs2076240	intron_variant; nc_transcript_variant	1(0/1/0)	1.0[CEU]; 0.835[CHB]; 1.0[JPT]; 0.89[YRI]
rs3025873	intron_variant; nc_transcript_variant	1(1/0/0)	0.833[CHB]; 1.0[JPT]