ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs362998 dbSNP Ensembl
Location chr20:10277621(Fwd)
Variant Alleles C/T
Ancestral Allele C
Functional Annotation downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; synonymous_variant.
Consequence to Transcript downstream_gene_variant(ENST00000430336)
intron_variant(ENST00000421143; ENST00000453544)
nc_transcript_variant(ENST00000421143; ENST00000453544; ENST00000495883)
non_coding_exon_variant(ENST00000495883)
synonymous_variant(ENST00000254976; ENST00000304886)
No. of Studies 3 (significant: 1; non-significant: 2; trend: 0)
Source Literature-origin

SNP related studies (count: 3)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Kim JW, 2007 C/T T Combined TDT P-value=0.09 (OR=1.36); Single marker analysis ...... Combined TDT P-value=0.09 (OR=1.36); Single marker analysis FBAT P-value=0.446; Exploratory analyses FBAT P-value=0.592 for co-morbid CD, P-value=0.179 for co-morbid MDD, P-value=0.345 for co-morbid BD More... No association was found between ADHD or co-morbidities of A...... No association was found between ADHD or co-morbidities of ADHD and this SNP More... Non-significant
Feng Y, 2005(b) C/G allelic TDT P-value=0.439, X2=0.6 in Irvine sampl...... allelic TDT P-value=0.439, X2=0.6 in Irvine sample; allelic TDT P-value=0.019, X2=5.488 in Toronto sample; TDT P-value=0.763, X2(1df)=0.091 in the Toronto sample by Inattentive subtype; TDT P-value=0.014, X2(1df)=6 in the Toronto sample by Combined subtype More... there was significant evidence for biased transmission in th...... there was significant evidence for biased transmission in the Toronto sample; TDT test was not significant in the Irvine sample; the observed evidence for biased transmission was not significant in the inattentive or hyperactive/impulsive subtype, but significant in the combined subtype in the Toronto sample More... Significant
Hawi, Z.,2013 C allelic:T=40,NT=32,X2=0.889,P-value=0.3458,EP-v...... C allelic:T=40,NT=32,X2=0.889,P-value=0.3458,EP-value=0.99 ,OR=1.25 More... TDT analyses of this SNP showed no significant nominal assoc...... TDT analyses of this SNP showed no significant nominal association with ADHD More... Non-significant

SNP related genes (count: 2)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 1)


SNPs in LD with rs362998 (count: 14) View in gBrowse (chr20:10247685..10280439 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 14)