ADHDgene Database

SNP Report

Basic Info

Name	rs362567 dbSNP Ensembl
Location	Chr20:10246091(Fwd)
Variant Alleles	A/G
Ancestral Allele	A
Functional Annotation	intron_variant; nc_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000453544; ENST00000304886; ENST00000254976; ENST00000421143; ENST00000430336) nc_transcript_variant(ENST00000453544; ENST00000421143)
No. of Studies	1 (significant: 1; non-significant: 0; trend: 0)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Brookes K, 2006	A/G		UNPHASED TDT P-value=0.0439; WHAP TDT P-value=0.012 UNPHASED TDT P-value=0.0439; WHAP TDT P-value=0.012	significant association was observed in both UNPHASED and WH...... significant association was observed in both UNPHASED and WHAP analyses More...	Significant

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
SNAP25	synaptosomal-associated protein, 25kDa	20p12-p11.2	18(13/5/0)

Approved Symbol	Approved Name	Location
SNAP25-AS1	SNAP25 antisense RNA 1	20p12.2

SNPs in LD with rs362567 (count: 4) View in gBrowse (chr20:10237223..10246091 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.


rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]
rs363020	intron_variant; nc_transcript_variant	1(1/0/0)	0.933[CEU]; 0.885[TSI]

rs_ID	Functional Annotation	r²[population]
rs6032832	intron_variant; nc_transcript_variant	0.881[CEU]
rs6039793	intron_variant; nc_transcript_variant	0.936[CEU]
rs4813024	intron_variant; nc_transcript_variant	0.885[TSI]