ADHDgene Database

SNP Report

Basic Info

Name	rs6039793 dbSNP Ensembl
Location	Chr20:10241483(Fwd)
Variant Alleles	G/C
Ancestral Allele	C
Functional Annotation	intron_variant; nc_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000453544; ENST00000304886; ENST00000254976; ENST00000421143; ENST00000430336) nc_transcript_variant(ENST00000453544; ENST00000421143)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
SNAP25	synaptosomal-associated protein, 25kDa	20p12-p11.2	18(13/5/0)

Approved Symbol	Approved Name	Location
SNAP25-AS1	SNAP25 antisense RNA 1	20p12.2

SNPs in LD with rs6039793 (count: 2) View in gBrowse (chr20:10237223..10246091 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs363020	intron_variant; nc_transcript_variant	1(1/0/0)	1.0[CEU]; 1.0[CHB]; 0.938[JPT]
rs362567	intron_variant; nc_transcript_variant	1(1/0/0)	0.936[CEU]