ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs36009 dbSNP Ensembl
Location chr16:55732620(Fwd)
Variant Alleles C/T
Ancestral Allele C
Functional Annotation downstream_gene_variant; intron_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000568529)
intron_variant(ENST00000219833; ENST00000379906; ENST00000414754; ENST00000561820; ENST00000566163; ENST00000567238; ENST00000568943)
upstream_gene_variant(ENST00000574918)
No. of Studies 3 (significant: 1; non-significant: 2; trend: 0)
Source Literature-origin

SNP related studies (count: 3)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Sengupta, S. M., 2012 G/A P-value=0.44, Z statistic (allele 1)=0.77 P-value=0.44, Z statistic (allele 1)=0.77 No significant association was found in this study. No significant association was found in this study. Non-significant
Guan L, 2009 single SNP association analyses: Nominal P-value=0.018, Empi...... single SNP association analyses: Nominal P-value=0.018, Empirical P-value=0.267 for ADHD-C More... non-significant for ADHD, but achieve nominal significance f...... non-significant for ADHD, but achieve nominal significance for ADHD-C More... Significant
Hawi, Z., 2012 G:A G P-value=0.2513, X2=1.32, OR=1.3, 95% CI=0.83-2.04 P-value=0.2513, X2=1.32, OR=1.3, 95% CI=0.83-2.04 The marker did not show significant association with ADHD. The marker did not show significant association with ADHD. Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs36009 (count: 5) View in gBrowse (chr16:55732620..55790108 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 5)