ADHDgene Database

SNP Report

Basic Info

Name	rs1814269 dbSNP Ensembl
Location	Chr16:55717028(Fwd)
Variant Alleles	G/-/A
Ancestral Allele	G
Functional Annotation	feature_truncation; intron_variant.
Consequence to Transcript	feature_truncation(ENST00000561820; ENST00000414754; ENST00000379906; ENST00000568943; ENST00000566163; ENST00000568529; ENST00000567238; ENST00000219833) intron_variant(ENST00000561820; ENST00000414754; ENST00000568943; ENST00000379906; ENST00000566163; ENST00000567238; ENST00000568529; ENST00000219833)
No. of Studies	2 (significant: 0; non-significant: 2; trend: 0)
Source	Literature-origin

SNP related studies (count: 2)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Sengupta, S. M., 2012	G/A		P-value=0.1, Z statistic (allele 1)=¨C1.66 P-value=0.1, Z statistic (allele 1)=¨C1.66	No significant association was found in this study. No significant association was found in this study.	Non-significant
Kim JW, 2008			X²=0, P-value=1, OR=1.00 X²=0, P-value=1, OR=1.00	not associated with ADHD not associated with ADHD	Non-significant

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
SLC6A2	solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2	16q12.2	16(10/5/1)
NET1	neuroepithelial cell transforming 1	10p15	0

SNPs in LD with rs1814269 (count: 2) View in gBrowse (chr16:55717028..55731044 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	r²[population]
rs1814270	intron_variant	0.843[ASW]; 0.885[CEU]; 0.856[LWK]; 0.868[MEX]; 0.955[TSI]
rs36011	downstream_gene_variant; intron_variant; upstream_gene_variant	0.836[LWK]