ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs1386488 dbSNP Ensembl
Location chr12:72344618(Fwd)
Variant Alleles C/A
Ancestral Allele A
Functional Annotation intron_variant; nc_transcript_variant.
Consequence to Transcript intron_variant(ENST00000333850; ENST00000546576)
nc_transcript_variant(ENST00000546576)
No. of Studies 2 (significant: 0; non-significant: 2; trend: 0)
Source Literature-origin

SNP related studies (count: 2)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Manor I, 2008 P-value>0.05 P-value>0.05 no significant association no significant association Non-significant
Sheehan K, 2007 A TDT test: P-value=0.644, OR=1.2 for full trios; P-value=1.2,...... TDT test: P-value=0.644, OR=1.2 for full trios; P-value=1.2, OR=1 for paternal transmission; P-value=0.557, OR=1.36 for maternal transmission. More... There is no significant difference in the transmission of al...... There is no significant difference in the transmission of alleles to ADHD cases. More... Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs1386488 (count: 19) View in gBrowse (chr12:72343287..72382466 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 19)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014