ADHDgene Database

SNP Report

Basic Info

Name	rs9905578 dbSNP Ensembl
Location	Chr17:4609640(Fwd)
Variant Alleles	C/T
Ancestral Allele	C
Functional Annotation	downstream_gene_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000497885) upstream_gene_variant(ENST00000571791; ENST00000570718; ENST00000571347; ENST00000572497; ENST00000575131; ENST00000570823; ENST00000570739; ENST00000574954; ENST00000575101; ENST00000574876; ENST00000436683; ENST00000571764; ENST00000574502; ENST00000269230; ENST00000572457; ENST00000573523; ENST00000466297; ENST00000269260; ENST00000575329; ENST00000575342; ENST00000575877; ENST00000381488; ENST00000346341; ENST00000572293; ENST00000301396; ENST00000412477; ENST00000573886; ENST00000576235; ENST00000570571; ENST00000574888; ENST00000571428)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 3)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
ARRB2	arrestin, beta 2	17p13	1(1/0/0)

Approved Symbol	Approved Name	Location
RPS12P29	ribosomal protein S12 pseudogene 29	17p13.2
PELP1	proline, glutamate and leucine rich protein 1	17p13.2

SNPs in LD with rs9905578 (count: 1) View in gBrowse (chr17:4609640..4620497 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs7208257	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant	1(1/0/0)	0.848[CEU]; 1.0[GIH]; 0.808[TSI]