ADHDgene Database

SNP Report

Basic Info

Name	rs8073904 dbSNP Ensembl
Location	Chr17:79095144(Fwd)
Variant Alleles	G/A
Ancestral Allele	A
Functional Annotation	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; synonymous_variant; upstream_gene_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000570932; ENST00000374792) downstream_gene_variant(ENST00000573441; ENST00000385003; ENST00000321300; ENST00000572339) intron_variant(ENST00000573469) nc_transcript_variant(ENST00000573469) synonymous_variant(ENST00000570932; ENST00000374792; ENST00000417379; ENST00000326724) upstream_gene_variant(ENST00000390137)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 5)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
BAIAP2	BAI1-associated protein 2	17q25	1(1/0/0)

Approved Symbol	Approved Name	Location
MIR657	microRNA 657	17q25.3
MIR3065	microRNA 3065	17
AATK	apoptosis-associated tyrosine kinase	17q25.3
MIR338	microRNA 338	17q25.3

SNPs in LD with rs8073904 (count: 2) View in gBrowse (chr17:79050148..79095144 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs4969385	NMD_transcript_variant; intron_variant; nc_transcript_variant; upstream_gene_variant	1(1/0/0)	0.843[CHB]
rs8079781	NMD_transcript_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant	1(1/0/0)	0.843[CHB]