ADHDgene Database

SNP Report

Basic Info

Name	rs738992 dbSNP Ensembl
Location	Chr22:33210005(Fwd)
Variant Alleles	C/T
Ancestral Allele	C
Functional Annotation	downstream_gene_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000356969) intron_variant(ENST00000358763; ENST00000332840; ENST00000462268; ENST00000266085) nc_transcript_variant(ENST00000462268)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
SYN3	synapsin III	22q12.3	1(0/1/0)

Approved Symbol	Approved Name	Location
TIMP3	TIMP metallopeptidase inhibitor 3	22q12.3

SNPs in LD with rs738992 (count: 1) View in gBrowse (chr22:33210005..33213319 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs242089	intron_variant; nc_transcript_variant; upstream_gene_variant	1(0/1/0)	1.0[CEU]; 0.952[CHB]; 1.0[CHD]; 0.975[GIH]; 1.0[JPT]; 1.0[MEX]; 0.916[MKK]; 0.977[TSI]