ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs242089 dbSNP Ensembl
Location chr22:33213319(Fwd)
Variant Alleles A/G
Ancestral Allele A
Functional Annotation intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript intron_variant(ENST00000266085; ENST00000332840; ENST00000358763; ENST00000462268)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Makkar R, 2007 A/G TDT P-value=0.414, X2=0.667 TDT P-value=0.414, X2=0.667 no significant biased transmission for any of the alleles of...... no significant biased transmission for any of the alleles of the polymorphism was observed using the TDT More... Non-significant

SNP related genes (count: 2)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 1)

SNPs in LD with rs242089 (count: 11) View in gBrowse (chr22:33177778..33237191 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 11)