ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs362599 dbSNP Ensembl
Location Chr20:10291812(Fwd)
Variant Alleles A/C
Ancestral Allele A
Functional Annotation downstream_gene_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript downstream_gene_variant(ENST00000254976; ENST00000495883; ENST00000304886)
intron_variant(ENST00000421143; ENST00000453544)
nc_transcript_variant(ENST00000421143; ENST00000453544)
No. of Studies 2 (significant: 0; non-significant: 2; trend: 0)
Source Literature-origin

SNP related studies (count: 2)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Kim JW, 2007 A/C C Single marker analysis FBAT P-value=1; Exploratory analyses ...... Single marker analysis FBAT P-value=1; Exploratory analyses FBAT P-value=1 for co-morbid CD, P-value=0.969 for co-morbid MDD, P-value=0.705 for co-morbid BD More... No association was found between ADHD or co-morbidities of A...... No association was found between ADHD or co-morbidities of ADHD and this SNP More... Non-significant
Nyman ES, 2007 No available information. No available information. No evidence of association was seen. No evidence of association was seen. Non-significant

SNP related genes (count: 3)

Literature-origin genes (count: 2)

Genes from other sources Help (count: 1)


SNPs in LD with rs362599 (count: 7) View in gBrowse (chr20:10291812..10301014 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 7)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014