ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs2556378 dbSNP Ensembl
Location chr2:60762502(Fwd)
Variant Alleles T/G
Ancestral Allele G
Functional Annotation intron_variant; nc_transcript_variant.
Consequence to Transcript intron_variant(ENST00000335712; ENST00000356842; ENST00000358510; ENST00000359629; ENST00000477659; ENST00000489516; ENST00000537768; ENST00000538214)
nc_transcript_variant(ENST00000477659; ENST00000489516)
No. of Studies 1 (significant: 0; non-significant: 0; trend: 1)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Hinney, A., 2011 T GWAS P-value=8.08E-07, OR=1.61, Replication FBAT P-value=0.4...... GWAS P-value=8.08E-07, OR=1.61, Replication FBAT P-value=0.4751, Combination P-value=1.70E-06 More... This GWAS in a small group of clinically ascertained young G...... This GWAS in a small group of clinically ascertained young German patients with ADHD and population-based controls did not reveal genome-wide significant findings. Replication attempts in further German and international samples did also not lead to a P-value(s) below 5E-08. More... Trend

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)

SNPs in LD with rs2556378 (count: 6) View in gBrowse (chr2:60760032..60774773 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 6)